RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 SRRM3A6NNA2 597 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 CLGNO14967 610 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 ATP2C2O75185 946 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 FLOT1O75955 427 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 HOXA7P31268 230 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 ANKRD20A8PQ5CZ79 823 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 PDXDC1Q6P996 788 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 CACNA2D4Q7Z3S7 1137 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 MIEF2Q96C03 454 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 REEP2Q9BRK0 252 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 CHMP2AO43633 222 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 ITGB5P18084 799 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 HSD17B3P37058 310 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 CASP5P51878 434 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 E2F5Q15329 346 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 FOXR2Q6PJQ5 311 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 IL31RAQ8NI17 732 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 INPP4AQ96PE3 977 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 BHMT2Q9H2M3 363 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 RPAP3Q9H6T3 665 aaPredicted RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 PLCB1Q9NQ66 1216 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 SLC12A6Q9UHW9 1150 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 PPP1R9AQ9ULJ8 1098 aa14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 TPX2Q9ULW0 747 aaKnown RBP14.39□□□□□ -0.11
SCAMP4-207ENST00000472442 ZBTB39O15060 712 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 HIRAP54198 1017 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 GHRHRQ02643 423 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 B3GNT9Q6UX72 402 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 SGSM3Q96HU1 749 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 RUSC1Q9BVN2 902 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 KCTD10Q9H3F6 313 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 STK24Q9Y6E0 443 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 DOCK1Q14185 1865 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 TRAPPC3O43617 180 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 KRT18P05783 430 aaKnown RBP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 ALAS1P13196 640 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 PTPRAP18433 802 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 KCTD19Q17RG1 926 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 NELFCDQ8IXH7 590 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 PIGOQ8TEQ8 1089 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 TAF1DQ9H5J8 278 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 EHMT1Q9H9B1 1298 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-207ENST00000472442 GRID2IPA4D2P6 1211 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 RSPH10B2B2RC85 870 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 RSPH10BP0C881 870 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 BACE1P56817 501 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 DCAF15Q66K64 600 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 MXRA8Q9BRK3 442 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 ZHX3Q9H4I2 956 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 GAS7O60861 476 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 EYA4O95677 639 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 KLRC1P26715 233 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 CTNNA1P35221 906 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 EPS15P42566 896 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 TNNC1P63316 161 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 ZNF844Q08AG5 666 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 LRIG3Q6UXM1 1119 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 RABGAP1Q9Y3P9 1069 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 H0YGN5 161 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 ECHS1P30084 290 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 SCTRP47872 440 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 TPH2Q8IWU9 490 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 USP38Q8NB14 1042 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 TSG101Q99816 390 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 TUFT1Q9NNX1 390 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 GGA3Q9NZ52 723 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 NFS1Q9Y697 457 aa14.37□□□□□ -0.11
SCAMP4-207ENST00000472442 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 HOXD13P35453 343 aa14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 MRPS9P82933 396 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 FKBP3Q00688 224 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 BYSLQ13895 437 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-207ENST00000472442 MEI1Q5TIA1 1274 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms