RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PHYKPLQ8IUZ5 450 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 AMER2Q8N7J2 671 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 C7orf31Q8N865 590 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 PLA2G15Q8NCC3 412 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 MIEF2Q96C03 454 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 ELF4Q99607 663 aaPredicted RBP6.97□□□□□ -1.29
CD46-213ENST00000471987 HAPLN2Q9GZV7 340 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 CEP72Q9P209 647 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 HECAQ9UBI9 543 aaPredicted RBP6.97□□□□□ -1.29
CD46-213ENST00000471987 ZKSCAN5Q9Y2L8 839 aa6.97□□□□□ -1.29
CD46-213ENST00000471987 ADAM8P78325 824 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 ADCY2Q08462 1091 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 KRT40Q6A162 431 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 ZZZ3Q8IYH5 903 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 TCF25Q9BQ70 676 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 ORAI3Q9BRQ5 295 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 IL23AQ9NPF7 189 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 DNAI1Q9UI46 699 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 RCAN3Q9UKA8 241 aa6.96□□□□□ -1.3
CD46-213ENST00000471987 UBE2QL1A1L167 161 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 TOX4O94842 621 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 JUNP05412 331 aaKnown RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 VSIG10L2P0DP72 767 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 MAKP20794 623 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 CREB3L3Q68CJ9 461 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 ESRP1Q6NXG1 681 aaKnown RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 KANSL1Q7Z3B3 1105 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 ZNF483Q8TF39 744 aaPredicted RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 UBXN4Q92575 508 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 DRC1Q96MC2 740 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 TRIM8Q9BZR9 551 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 PITHD1Q9GZP4 211 aaPredicted RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 OXSMQ9NWU1 459 aa6.95□□□□□ -1.3
CD46-213ENST00000471987 WDR33Q9C0J8 1336 aaKnown RBP6.95□□□□□ -1.3
CD46-213ENST00000471987 PRPF6O94906 941 aaKnown RBP6.94□□□□□ -1.3
CD46-213ENST00000471987 PEX11BO96011 259 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 ADH4P08319 380 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 DPTQ07507 201 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 CNGB1Q14028 1251 aaPredicted RBP6.94□□□□□ -1.3
CD46-213ENST00000471987 TCEA2Q15560 299 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 ELAVL1Q15717 326 aaKnown RBP6.94□□□□□ -1.3
CD46-213ENST00000471987 FNDC7Q5VTL7 733 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 MTG2Q9H4K7 406 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 C14orf93Q9H972 538 aaKnown RBP6.94□□□□□ -1.3
CD46-213ENST00000471987 IFT57Q9NWB7 429 aa6.94□□□□□ -1.3
CD46-213ENST00000471987 A0A0A6YYJ9 748 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 GAS7O60861 476 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 APOL3O95236 402 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
CD46-213ENST00000471987 MAN2A2P49641 1150 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 MAN2A1Q16706 1144 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 CRB2Q5IJ48 1285 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 MFSD5Q6N075 450 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 KIAA1841Q6NSI8 718 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 Q6ZRM9 215 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 NEU4Q8WWR8 484 aaPredicted RBP6.93□□□□□ -1.3
CD46-213ENST00000471987 MYL10Q9BUA6 226 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 OSBPL6Q9BZF3 934 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 MMRN2Q9H8L6 949 aa6.93□□□□□ -1.3
CD46-213ENST00000471987 OPHN1O60890 802 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 F2P00734 622 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 HNRNPLP14866 589 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■□□□□ 9.2
CD46-213ENST00000471987 KIR2DL3P43628 341 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 SCNN1GP51170 649 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 SMAD3P84022 425 aaKnown RBP6.92□□□□□ -1.3
CD46-213ENST00000471987 PURAQ00577 322 aaKnown RBP6.92□□□□□ -1.3
CD46-213ENST00000471987 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 HOMER1Q86YM7 354 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 PASD1Q8IV76 773 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 EFHBQ8N7U6 833 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 RTF1Q92541 710 aaKnown RBP6.92□□□□□ -1.3
CD46-213ENST00000471987 CHFRQ96EP1 664 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 POFUT1Q9H488 388 aa6.92□□□□□ -1.3
CD46-213ENST00000471987 REXO2Q9Y3B8 237 aaKnown RBP6.92□□□□□ -1.3
CD46-213ENST00000471987 FSBPO95073 299 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
CD46-213ENST00000471987 CD40P25942 277 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 NEK4P51957 841 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 CMTM4Q8IZR5 234 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 ARL8AQ96BM9 186 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 HIST1H2AHQ96KK5 128 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 HIST1H2AJQ99878 128 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 NOL10Q9BSC4 688 aaKnown RBP6.91□□□□□ -1.3
CD46-213ENST00000471987 GPR87Q9BY21 358 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
CD46-213ENST00000471987 H2AFY2Q9P0M6 372 aaPredicted RBP6.91□□□□□ -1.3
CD46-213ENST00000471987 OVOL3O00110 214 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 MTSS1O43312 755 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 KPNA6O60684 536 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 MFAP3LO75121 409 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 IPO13O94829 963 aaKnown RBP6.9□□□□□ -1.3
CD46-213ENST00000471987 INHBCP55103 352 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 NPEPPSP55786 919 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 LRRC32Q14392 662 aa6.9□□□□□ -1.3
CD46-213ENST00000471987 UNQ6494/PRO21346Q6UXR6 183 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms