RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DAPK3O43293 454 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 OPHN1O60890 802 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 TACR2P21452 398 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 LSSP48449 732 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 ATP2C1P98194 919 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-202ENST00000471307 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 ESPNLQ6ZVH7 1005 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 PLA2G15Q8NCC3 412 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 HIST1H2AHQ96KK5 128 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 HIST1H2AJQ99878 128 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 TMPRSS5Q9H3S3 457 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 AGO3Q9H9G7 860 aaKnown RBP7.96□□□□□ -1.14
CCDC39-202ENST00000471307 AURKAIP1Q9NWT8 199 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-202ENST00000471307 MAGEL2Q9UJ55 1249 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 MAPRE3Q9UPY8 281 aa7.96□□□□□ -1.14
CCDC39-202ENST00000471307 RBM8AQ9Y5S9 174 aaKnown RBP7.96□□□□□ -1.14
CCDC39-202ENST00000471307 A0A1W2PRX2 142 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 GSG1L2A8MUP6 293 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 CYP27B1O15528 508 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 TGM5O43548 720 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 APOL3O95236 402 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 LSP1P33241 339 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 BPIFB4P59827 614 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 SEPT7Q16181 437 aaKnown RBP7.95□□□□□ -1.14
CCDC39-202ENST00000471307 C11orf74Q86VG3 221 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 ZNF610Q8N9Z0 462 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 ZNF747Q9BV97 191 aa7.95□□□□□ -1.14
CCDC39-202ENST00000471307 A0A087X0B3 334 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 ST20-MTHFSA0A0A6YYL1 179 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 JUNP05412 331 aaKnown RBP7.94□□□□□ -1.14
CCDC39-202ENST00000471307 VSIG10L2P0DP72 767 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 ACRV1P26436 265 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 ADAM8P78325 824 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 SAFB2Q14151 953 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC39-202ENST00000471307 RNF207Q6ZRF8 634 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
CCDC39-202ENST00000471307 WNT8AQ9H1J5 351 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 VPS11Q9H270 941 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 C14orf93Q9H972 538 aaKnown RBP7.94□□□□□ -1.14
CCDC39-202ENST00000471307 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 MSRAQ9UJ68 235 aa7.94□□□□□ -1.14
CCDC39-202ENST00000471307 TLDC2A0PJX2 215 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 MTSS1O43312 755 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 PDE8AO60658 829 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 FSBPO95073 299 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 C6P13671 934 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 IL2P60568 153 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 UNQ6494/PRO21346Q6UXR6 183 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 D2HGDHQ8N465 521 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 ZNF808Q8N4W9 903 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-202ENST00000471307 ANKRD53Q8N9V6 530 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 PPP1R14CQ8TAE6 165 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 GPR101Q96P66 508 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-202ENST00000471307 GPHA2Q96T91 129 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 TLR9Q9NR96 1032 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 SPTLC3Q9NUV7 552 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 DNAI1Q9UI46 699 aa7.93□□□□□ -1.14
CCDC39-202ENST00000471307 TOX4O94842 621 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 FKBP9O95302 570 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 ADCYAP1R1P41586 468 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 GPR15P49685 360 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 DHCR24Q15392 516 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 TERF2Q15554 542 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 USP39Q53GS9 565 aaKnown RBP7.92□□□□□ -1.14
CCDC39-202ENST00000471307 CCDC178Q5BJE1 867 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 MIIPQ5JXC2 388 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 FKBP9P1Q75LS8 142 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 ANKRD35Q8N283 1001 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 CDYL2Q8N8U2 506 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 FERMT2Q96AC1 680 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 ZNF496Q96IT1 587 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-202ENST00000471307 RPL10LQ96L21 214 aaKnown RBP7.92□□□□□ -1.14
CCDC39-202ENST00000471307 TMA7Q9Y2S6 64 aaKnown RBP7.92□□□□□ -1.14
CCDC39-202ENST00000471307 MYPNQ86TC9 1320 aa7.92□□□□□ -1.14
CCDC39-202ENST00000471307 GOLGA8BA8MQT2 603 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-202ENST00000471307 FZD7O75084 574 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 MYCLP1P12525 358 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-202ENST00000471307 HSD3B2P26439 372 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 HIBADHP31937 336 aaKnown RBP7.91□□□□□ -1.14
CCDC39-202ENST00000471307 KIR2DL3P43628 341 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 FRMD7Q6ZUT3 714 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 SGMS1Q86VZ5 419 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 UNC5BQ8IZJ1 945 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 THEMISQ8N1K5 641 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-202ENST00000471307 TMEM176AQ96HP8 235 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 EMC7Q9NPA0 242 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 IL23AQ9NPF7 189 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 GIT1Q9Y2X7 761 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 PCDHB6Q9Y5E3 794 aa7.91□□□□□ -1.14
CCDC39-202ENST00000471307 A0A0A6YYK5 440 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-202ENST00000471307 CAPN14A8MX76 684 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 AMHP03971 560 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 PFKMP08237 780 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 STAT3P40763 770 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 GDF5P43026 501 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 GYS2P54840 703 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 FOXE3Q13461 319 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 NRN1LQ496H8 165 aa7.9□□□□□ -1.14
CCDC39-202ENST00000471307 KRT40Q6A162 431 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms