RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 KCTD1Q719H9 257 aa15.22■□□□□ 0.03
HDAC7-219ENST00000470668 CENPUQ71F23 418 aa15.22■□□□□ 0.03
HDAC7-219ENST00000470668 AGGF1Q8N302 714 aaeCLIP15.22■□□□□ 0.03
HDAC7-219ENST00000470668 PDZD8Q8NEN9 1154 aa15.22■□□□□ 0.03
HDAC7-219ENST00000470668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.22■□□□□ 0.03
HDAC7-219ENST00000470668 KRT1P04264 644 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 BMP6P22004 513 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 MMEL1Q495T6 779 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 JAMLQ86YT9 394 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 RFFLQ8WZ73 363 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 SCINQ9Y6U3 715 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 GOLGA8IPA6NC78 632 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 GOLGA8JA6NMD2 632 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 POTECB2RU33 542 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 CPA2P48052 419 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 PDIK1LQ8N165 341 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 AENQ8WTP8 325 aaKnown RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 GRAMD1AQ96CP6 724 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 CNOT8Q9UFF9 292 aaKnown RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 CHORDC1Q9UHD1 332 aaPredicted RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 HAO1Q9UJM8 370 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 C15orf41Q9Y2V0 281 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 PALLDQ8WX93 1383 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 AP2B1P63010 937 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 FOXO4P98177 505 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 ARHGAP18Q8N392 663 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 SLC44A5Q8NCS7 719 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 EPS8L3Q8TE67 593 aaKnown RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 MTMR8Q96EF0 704 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 TRIM56Q9BRZ2 755 aaKnown RBP15.21■□□□□ 0.03
HDAC7-219ENST00000470668 ARHGAP20Q9P2F6 1191 aa15.21■□□□□ 0.03
HDAC7-219ENST00000470668 NR3C1P04150 777 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 SLC9A1P19634 815 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 GPC5P78333 572 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 NAB2Q15742 525 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 KAZALD1Q96I82 304 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 ERP44Q9BS26 406 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 PACSIN1Q9BY11 444 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 EDEM3Q9BZQ6 932 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 CDC42BPGQ6DT37 1551 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 CCDC195A0A1B0GUA6 201 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 ZWINTO95229 277 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 DCLK2Q8N568 766 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 PRCCQ92733 491 aaPredicted RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 CLTCQ00610 1675 aaKnown RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 TDP2O95551 362 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 KRT17Q04695 432 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 DHX34Q14147 1143 aaKnown RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 KIAA0825Q8IV33 1275 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 PHF20Q9BVI0 1012 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 ZC3H13Q5T200 1668 aaKnown RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 APOEP02649 317 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 GCLMP48507 274 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 BTKQ06187 659 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 HADHQ16836 314 aaKnown RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 POMGNT1Q8WZA1 660 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
HDAC7-219ENST00000470668 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
HDAC7-219ENST00000470668 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 TEX9Q8N6V9 391 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 FBXO25Q8TCJ0 367 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 KAT2BQ92831 832 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 OLFM3Q96PB7 478 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 CALN1Q9BXU9 219 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 TRABDQ9H4I3 376 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 TRAF3IP3Q9Y228 551 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 NOP56O00567 594 aaKnown RBP15.19■□□□□ 0.02
HDAC7-219ENST00000470668 MARK3P27448 753 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 USP11P51784 963 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 RCSD1Q6JBY9 416 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 ZBED8Q8IZ13 594 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 SLC35G2Q8TBE7 412 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 RAD54LQ92698 747 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 KLF6Q99612 283 aaPredicted RBP15.19■□□□□ 0.02
HDAC7-219ENST00000470668 CCSER1Q9C0I3 900 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 LZTS1Q9Y250 596 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 SUPT3HO75486 399 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 CRLF3Q8IUI8 442 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 ERGIC2Q96RQ1 377 aa15.19■□□□□ 0.02
HDAC7-219ENST00000470668 PTPRUQ92729 1446 aa15.18■□□□□ 0.02
HDAC7-219ENST00000470668 COPEO14579 308 aa15.18■□□□□ 0.02
HDAC7-219ENST00000470668 CDH16O75309 829 aa15.18■□□□□ 0.02
HDAC7-219ENST00000470668 ENO1P06733 434 aaKnown RBP15.18■□□□□ 0.02
HDAC7-219ENST00000470668 EEF1B2P24534 225 aaKnown RBP15.18■□□□□ 0.02
HDAC7-219ENST00000470668 BTDP43251 543 aa15.18■□□□□ 0.02
HDAC7-219ENST00000470668 MKRN3Q13064 507 aaKnown RBP15.18■□□□□ 0.02
HDAC7-219ENST00000470668 MED21Q13503 144 aa15.18■□□□□ 0.02
HDAC7-219ENST00000470668 TMEM259Q4ZIN3 620 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms