RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-206ENST00000470241 TRIM9Q9C026 710 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 ODF2LQ9ULJ1 636 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 ARID2Q68CP9 1835 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 FRMD3A2A2Y4 597 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 GOLGA6L22H0YM25 854 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 M0QZ92 97 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 CXCL10P02778 98 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 PLS3P13797 630 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 DARSP14868 501 aaKnown RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 CSF2RAP15509 400 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 EIF4BP23588 611 aaKnown RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 MCM4P33991 863 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 NPTX2P47972 431 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 PEX3P56589 373 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 PTENP60484 403 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 AMPD3Q01432 767 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 MLLT1Q03111 559 aaPredicted RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 TFDP1Q14186 410 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 TIGD1Q96MW7 591 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 BLZF1Q9H2G9 400 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 C17orf75Q9HAS0 396 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 DACT1Q9NYF0 836 aa11.68□□□□□ -0.54
SMC1A-206ENST00000470241 NOC2LQ9Y3T9 749 aaKnown RBP11.68□□□□□ -0.54
SMC1A-206ENST00000470241 ADGRA3Q8IWK6 1321 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 H0YGN5 161 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 TBCAO75347 108 aaKnown RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 FAM13AO94988 1023 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 PARNO95453 639 aaKnown RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 GHRP10912 638 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 RFC2P35250 354 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 NAMPTP43490 491 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 EPHB4P54760 987 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 CDCA2Q69YH5 1023 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 FAM228AQ86W67 206 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 TMEM199Q8N511 208 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 SCLT1Q96NL6 688 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 FIZ1Q96SL8 496 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 KIFC3Q9BVG8 833 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 NFKBIZQ9BYH8 718 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 GCOM2Q9BZD3 368 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-206ENST00000470241 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 MINDY3Q9H8M7 445 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 PARVGQ9HBI0 331 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
SMC1A-206ENST00000470241 CCDC169A6NNP5 214 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 KLRC4O43908 158 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 KINO60870 393 aaKnown RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 RPS6KA5O75582 802 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 MYL1P05976 194 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 IDEP14735 1019 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 GAP43P17677 238 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 FGFR4P22455 802 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 CD52P31358 61 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 MAGEA10P43363 369 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 PHKA2P46019 1235 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 ASIC1P78348 528 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 FPGSQ05932 587 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 MBTD1Q05BQ5 628 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 DPYDQ12882 1025 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 DMP1Q13316 513 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 PLEKHG4Q58EX7 1191 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 C16orf59Q7L2K0 433 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 SRGAP1Q7Z6B7 1085 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 USP38Q8NB14 1042 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 LBHD1Q9BQE6 289 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 ERVK-5Q9HDB9 667 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 IL23AQ9NPF7 189 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 KMT5AQ9NQR1 393 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 LARSQ9P2J5 1176 aaKnown RBP11.66□□□□□ -0.54
SMC1A-206ENST00000470241 ARHGAP28Q9P2N2 729 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
SMC1A-206ENST00000470241 PVALEFA0A1B0GWK0 134 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms