RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 A0A087X0B3 334 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 NBNO60934 754 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 TBCAO75347 108 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 FGBP02675 491 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 SRGAP2CP0DJJ0 459 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 MAPTP10636 758 aaKnown RBP13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 PLS3P13797 630 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 CSF2RAP15509 400 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 GAP43P17677 238 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 GLRA2P23416 452 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 NDUFA8P51970 172 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 ZNF131P52739 623 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 PTENP60484 403 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 FAM160A1Q05DH4 1040 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 DMP1Q13316 513 aaPredicted RBP13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 DRP2Q13474 957 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 IKBKEQ14164 716 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 KIZQ2M2Z5 673 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 CNKSR3Q6P9H4 555 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 CHAMP1Q96JM3 812 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 C7orf25Q9BPX7 421 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 RUSC1Q9BVN2 902 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 PARVGQ9HBI0 331 aa13.97□□□□□ -0.17
SPTLC1-204ENST00000469778 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 TCHHQ07283 1943 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 A0A087WZ62 844 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 A0A1W2PPC1 479 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 HIP1RO75146 1068 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 ZNF202O95125 648 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 CTSHP09668 335 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 AXLP30530 894 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 MAGEA10P43363 369 aaPredicted RBP13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 TMEM62Q0P6H9 643 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 PAK2Q13177 524 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 GIT2Q14161 759 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 LPIN1Q14693 890 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 MBTPS1Q14703 1052 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 CCDC65Q8IXS2 484 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 RNF149Q8NC42 400 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 DEPTORQ8TB45 409 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 DDX12PQ92771 950 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 SCLYQ96I15 445 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 NLRP4Q96MN2 994 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 FDXACB1Q9BRP7 624 aaPredicted RBP13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
SPTLC1-204ENST00000469778 PDE4DIPQ5VU43 2346 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 FAM13AO94988 1023 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 MDM2Q00987 491 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 MAPK7Q13164 816 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 GPNMBQ14956 572 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 FAM187BQ17R55 369 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 FMR1NBQ8N0W7 255 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 DAW1Q8N136 415 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 CNNM3Q8NE01 707 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 CCDC51Q96ER9 411 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 OSMRQ99650 979 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 REEP2Q9BRK0 252 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 UBE2OQ9C0C9 1292 aaKnown RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 PRMT7Q9NVM4 692 aaPredicted RBP13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 DACT1Q9NYF0 836 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 PADI3Q9ULW8 664 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 GINS2Q9Y248 185 aa13.95□□□□□ -0.18
SPTLC1-204ENST00000469778 MYMKA6NI61 221 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 LRRIQ4A6NIV6 560 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 K7ERI5 159 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ACTN4O43707 911 aaKnown RBP13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 PRPF40AO75400 957 aaKnown RBP13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 GHRP10912 638 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 SKIP12755 728 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 NPTX2P47972 431 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 PEX3P56589 373 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ALCAMQ13740 583 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 CAPSQ13938 189 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 MAPK6Q16659 721 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 KRBA2Q6ZNG9 492 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 MYCT1Q8N699 235 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 DBF4BQ8NFT6 615 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 PHOSPHO2Q8TCD6 241 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ASAP3Q8TDY4 903 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms