RNA–Protein interactions for RNA: ENST00000469366.1

MACF1-212, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-212ENST00000469366 PTGDRQ13258 359 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 IL17AQ16552 155 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 ECM1Q16610 540 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
MACF1-212ENST00000469366 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 MRPL38Q96DV4 380 aaKnown RBP13.12□□□□□ -0.31
MACF1-212ENST00000469366 NLRP4Q96MN2 994 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
MACF1-212ENST00000469366 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
MACF1-212ENST00000469366 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
MACF1-212ENST00000469366 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 GTF3C3Q9Y5Q9 886 aa13.12□□□□□ -0.31
MACF1-212ENST00000469366 A0A0U1RQF3 1178 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 TBKBP1A7MCY6 615 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 RPA1P27694 616 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 ARL2P36404 184 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■□□ 14.7
MACF1-212ENST00000469366 TFF2Q03403 129 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 CAMK1Q14012 370 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 LRRC55Q6ZSA7 311 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 ASAP3Q8TDY4 903 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 MTRQ99707 1265 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 CWH43Q9H720 699 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 CHST12Q9NRB3 414 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
MACF1-212ENST00000469366 THEGQ9P2T0 379 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 C5orf42Q9H799 3197 aa13.11□□□□□ -0.31
MACF1-212ENST00000469366 ASAP2O43150 1006 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 GAS2O43903 313 aaKnown RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 DGAT1O75907 488 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 ITGB1P05556 798 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
MACF1-212ENST00000469366 DNAJB1P25685 340 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 HOXA11P31270 313 aaPredicted RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 PDIA5Q14554 519 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 IGSF22Q8N9C0 903 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 P2RX5Q93086 422 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 ALG13Q9NP73 1137 aaKnown RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 DBR1Q9UK59 544 aaKnown RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 PLAGL2Q9UPG8 496 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
MACF1-212ENST00000469366 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
MACF1-212ENST00000469366 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 EOMESO95936 686 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 GLRA2P23416 452 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 PHKA2P46019 1235 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 PTENP60484 403 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 MRPS5P82675 430 aaKnown RBP13.09□□□□□ -0.31
MACF1-212ENST00000469366 CAPSQ13938 189 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
MACF1-212ENST00000469366 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
MACF1-212ENST00000469366 KLHL23Q8NBE8 558 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
MACF1-212ENST00000469366 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
MACF1-212ENST00000469366 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
MACF1-212ENST00000469366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
MACF1-212ENST00000469366 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 H3BQV1 296 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
MACF1-212ENST00000469366 ZNF623O75123 536 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 BMP1P13497 986 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 MUTP22033 750 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 CDC25AP30304 524 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 CCT6AP40227 531 aaKnown RBP13.08□□□□□ -0.32
MACF1-212ENST00000469366 PRPHP41219 470 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
MACF1-212ENST00000469366 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
MACF1-212ENST00000469366 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms