RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 HGSO14964 777 aaPredicted RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 RASSF9O75901 435 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CALCAP01258 141 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 GYS1P13807 737 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 RPL13P26373 211 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 DDR1Q08345 913 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 TTC27Q6P3X3 843 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 FAM228AQ86W67 206 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CACNA2D3Q8IZS8 1091 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CFBP00751 764 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 FERP16591 822 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 DRD4P21917 467 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 BIRC3Q13489 604 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 ZDHHC24Q6UX98 284 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CCDC25Q86WR0 208 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 JAMLQ86YT9 394 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 TATDN2Q93075 761 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 FAM84AQ96KN4 292 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 PAGR1Q9BTK6 254 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 ADAMTSL1Q8N6G6 1762 aa13.08□□□□□ -0.31
VARS2-205ENST00000469358 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 TNFAIP3P21580 790 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 SCTRP47872 440 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 PPATQ06203 517 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 LRRC14Q15048 493 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 MBOAT7Q96N66 472 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 ERP44Q9BS26 406 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 ALG6Q9Y672 507 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 SLITRK3O94933 977 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 NDUFB10O96000 172 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 PSMC2P35998 433 aaKnown RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 SMTNP53814 917 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 ICA1Q05084 483 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 MESDQ14696 234 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 MGARPQ8TDB4 240 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 AMNQ9BXJ7 453 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
VARS2-205ENST00000469358 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
VARS2-205ENST00000469358 MMEP08473 750 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 MAP2K2P36507 400 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 RPL21P46778 160 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 PMS2P54278 862 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 PTENP60484 403 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 DUPD1Q68J44 220 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 CYB5D1Q6P9G0 228 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 PHLDB2Q86SQ0 1253 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 ARHGEF19Q8IW93 802 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 FUKQ8N0W3 1084 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 C1orf131Q8NDD1 294 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 PPFIA2O75334 1257 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 CREB1P16220 341 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 AGBL2Q5U5Z8 902 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 STK33Q9BYT3 514 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 UBE2TQ9NPD8 197 aaPredicted RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 EYA4O95677 639 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 ADCY1Q08828 1119 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 FAM133BQ5BKY9 247 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 ODR4Q5SWX8 454 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms