RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 CDKN1CP49918 316 aaPredicted RBP7.48□□□□□ -1.21
XRN1-207ENST00000468894 SESN2P58004 480 aaPredicted RBP7.48□□□□□ -1.21
XRN1-207ENST00000468894 TRIM25Q14258 630 aaKnown RBP7.48□□□□□ -1.21
XRN1-207ENST00000468894 PITRM1Q5JRX3 1037 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 RNF219Q5W0B1 726 aaPredicted RBP7.48□□□□□ -1.21
XRN1-207ENST00000468894 SLC41A1Q8IVJ1 513 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 GFM2Q969S9 779 aaKnown RBP7.48□□□□□ -1.21
XRN1-207ENST00000468894 HIST1H2AHQ96KK5 128 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 HIST1H2AJQ99878 128 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 NUMBLQ9Y6R0 609 aa7.48□□□□□ -1.21
XRN1-207ENST00000468894 PHLDB1Q86UU1 1377 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 C2orf78A6NCI8 922 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 NPEPPSL1A6NEC2 478 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 H2AFYO75367 372 aaKnown RBP7.47□□□□□ -1.21
XRN1-207ENST00000468894 SEC24DO94855 1032 aaPredicted RBP7.47□□□□□ -1.21
XRN1-207ENST00000468894 PLP2Q04941 152 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 PPARAQ07869 468 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 DUSP8Q13202 625 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
XRN1-207ENST00000468894 CT83Q5H943 113 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 CLEC14AQ86T13 490 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 PPP1R14CQ8TAE6 165 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 GNRHR2Q96P88 292 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 FDXACB1Q9BRP7 624 aaPredicted RBP7.47□□□□□ -1.21
XRN1-207ENST00000468894 USP18Q9UMW8 372 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 COL4A3BPQ9Y5P4 624 aa7.47□□□□□ -1.21
XRN1-207ENST00000468894 LPLP06858 475 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 ENPP1P22413 925 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 ERVK-21P61565 698 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 ERICH6BQ5W0A0 696 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 GLB1LQ6UWU2 654 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 CIR1Q86X95 450 aaPredicted RBP7.46□□□□□ -1.22
XRN1-207ENST00000468894 LMBR1Q8WVP7 490 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 LPPQ93052 612 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 ACAP3Q96P50 834 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 KCTD10Q9H3F6 313 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 C14orf119Q9NWQ9 140 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 PUF60Q9UHX1 559 aaKnown RBP7.46□□□□□ -1.22
XRN1-207ENST00000468894 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.22
XRN1-207ENST00000468894 RBM8AQ9Y5S9 174 aaKnown RBP7.46□□□□□ -1.22
XRN1-207ENST00000468894 K7ESM1 405 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 CR2P20023 1033 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 CANXP27824 592 aaKnown RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 ADAM8P78325 824 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 ACAP1Q15027 740 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 GAREM2Q75VX8 874 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 TAX1BP1Q86VP1 789 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 GAB3Q8WWW8 586 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 EAF2Q96CJ1 260 aaPredicted RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 SLC7A6OSQ96CW6 309 aaPredicted RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 AHCYL2Q96HN2 611 aaKnown RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 GPATCH3Q96I76 525 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 TRIM8Q9BZR9 551 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 PCDH12Q9NPG4 1184 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 EVLQ9UI08 416 aaPredicted RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 PRSS50Q9UI38 385 aa7.45□□□□□ -1.22
XRN1-207ENST00000468894 CNOT11Q9UKZ1 510 aaKnown RBP7.45□□□□□ -1.22
XRN1-207ENST00000468894 K7ESF4 209 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 CDC14BO60729 498 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 CDK11BP21127 795 aaKnown RBP7.44□□□□□ -1.22
XRN1-207ENST00000468894 GPR15P49685 360 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 ADCY7P51828 1080 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 ATP2C1P98194 919 aaPredicted RBP7.44□□□□□ -1.22
XRN1-207ENST00000468894 TCIRG1Q13488 830 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 SAFB2Q14151 953 aaKnown RBP eCLIP7.44□□□□□ -1.22
XRN1-207ENST00000468894 ICAM4Q14773 271 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.44□□□□□ -1.22
XRN1-207ENST00000468894 TCTN3Q6NUS6 607 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 NECAB2Q7Z6G3 386 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 GPR135Q8IZ08 494 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 PRPF38AQ8NAV1 312 aaKnown RBP7.44□□□□□ -1.22
XRN1-207ENST00000468894 PIK3C3Q8NEB9 887 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 TGFBRAP1Q8WUH2 860 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 GCDHQ92947 438 aaPredicted RBP7.44□□□□□ -1.22
XRN1-207ENST00000468894 ORAI2Q96SN7 254 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 OSBPL6Q9BZF3 934 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 KCNG1Q9UIX4 513 aa7.44□□□□□ -1.22
XRN1-207ENST00000468894 ANKRD62A6NC57 917 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 PATE3B3GLJ2 98 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 SLC26A4O43511 780 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 FOXS1O43638 330 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 GAAP10253 952 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 SCAND1P57086 179 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 BPIFB4P59827 614 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 EFEMP1Q12805 493 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 FAPQ12884 760 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 UGT8Q16880 541 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 CCDC178Q5BJE1 867 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 UNC5BQ8IZJ1 945 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 PLA2G15Q8NCC3 412 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 DNERQ8NFT8 737 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 PLA2G12BQ9BX93 195 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 C12orf65Q9H3J6 166 aaKnown RBP7.43□□□□□ -1.22
XRN1-207ENST00000468894 SLC5A4Q9NY91 659 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 EDARQ9UNE0 448 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 CDY2AQ9Y6F7 541 aa7.43□□□□□ -1.22
XRN1-207ENST00000468894 PMS2P1A4D2B8 440 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms