RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 MAGEL2Q9UJ55 1249 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 A0A087X1B8 175 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 M0R2C6 588 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 GLRX3O76003 335 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 KRT37O76014 449 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 IGFALSP35858 605 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 GYS2P54840 703 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 CRHR2Q13324 411 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 ZNF460Q14592 562 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 GAREM2Q75VX8 874 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 CHST14Q8NCH0 376 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 HAPLN2Q9GZV7 340 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 MTFR1LQ9H019 292 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 KCMF1Q9P0J7 381 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 SAMD15Q9P1V8 674 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 PLAAQ9Y263 795 aa6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
PRPF40A-205ENST00000467114 UBA6A0AVT1 1052 aaPredicted RBP6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 ASLP04424 464 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 CYP17A1P05093 508 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 SCNN1GP51170 649 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 BPIFB4P59827 614 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 SLFN12LQ6IEE8 588 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 Q6ZRM9 215 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 CLEC14AQ86T13 490 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 RPL10LQ96L21 214 aaKnown RBP6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 MAGEC2Q9UBF1 373 aaPredicted RBP6.47□□□□□ -1.37
PRPF40A-205ENST00000467114 GSG1L2A8MUP6 293 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 TRAF5O00463 557 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 SLC25A3Q00325 362 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 PCSK4Q6UW60 755 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 ZNF627Q7L945 461 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 BMP8AQ7Z5Y6 402 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 NME9Q86XW9 330 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 ULK2Q8IYT8 1036 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 CLIP3Q96DZ5 547 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 PRRX2Q99811 253 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 SLC2A4RGQ9NR83 387 aa6.46□□□□□ -1.38
PRPF40A-205ENST00000467114 EPHA7Q15375 998 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 MRGPRGQ86SM5 289 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 PLA2G15Q8NCC3 412 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 DYDC2Q96IM9 177 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 WDR92Q96MX6 357 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 IL23AQ9NPF7 189 aa6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 REXO2Q9Y3B8 237 aaKnown RBP6.45□□□□□ -1.38
PRPF40A-205ENST00000467114 SBNO2Q9Y2G9 1366 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 UBE2QL1A1L167 161 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 PTPDC1A2A3K4 754 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 H7C1D1 291 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 VSIG10L2P0DP72 767 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 MAN2A2P49641 1150 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 BCAR1P56945 870 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 CNGB1Q14028 1251 aaPredicted RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 TOB2Q14106 344 aaPredicted RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 ELAVL1Q15717 326 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 Q6ZPA2 131 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 HTR3DQ70Z44 454 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 LRRTM3Q86VH5 581 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 THNSL2Q86YJ6 484 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 DHX37Q8IY37 1157 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 GSPT2Q8IYD1 628 aaKnown RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 KIAA1958Q8N8K9 716 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 TCF25Q9BQ70 676 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 PCIF1Q9H4Z3 704 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 POLR3BQ9NW08 1133 aaPredicted RBP6.44□□□□□ -1.38
PRPF40A-205ENST00000467114 GOLGA8BA8MQT2 603 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 VIL1P09327 827 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 KRT4P19013 534 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 PTX3P26022 381 aaPredicted RBP6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 MASP1P48740 699 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 RABGGTBP53611 331 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 MYBPC3Q14896 1274 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 RNF180Q86T96 592 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 TUBGCP5Q96RT8 1024 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 TARS2Q9BW92 718 aaKnown RBP6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 PITHD1Q9GZP4 211 aaPredicted RBP6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 GPRC5BQ9NZH0 403 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 XDHP47989 1333 aa6.43□□□□□ -1.38
PRPF40A-205ENST00000467114 CBX4O00257 560 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 OPA1O60313 960 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 TOX4O94842 621 aa6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 JUNP05412 331 aaKnown RBP6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 POU3F3P20264 500 aaPredicted RBP6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 SMAD3P84022 425 aaKnown RBP6.42□□□□□ -1.38
PRPF40A-205ENST00000467114 ZNF174Q15697 407 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms