RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 IL23AQ9NPF7 189 aa5.9□□□□□ -1.46
CHMP2B-202ENST00000466696 RCAN3Q9UKA8 241 aa5.9□□□□□ -1.46
CHMP2B-202ENST00000466696 SYNPO2Q9UMS6 1093 aa5.9□□□□□ -1.46
CHMP2B-202ENST00000466696 TNPO3Q9Y5L0 923 aaKnown RBP5.9□□□□□ -1.46
CHMP2B-202ENST00000466696 UBE2QL1A1L167 161 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 VSIG10L2P0DP72 767 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 SCNN1GP51170 649 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 SMAD3P84022 425 aaKnown RBP5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 KRT40Q6A162 431 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 Q6ZRM9 215 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 LDLRAD3Q86YD5 345 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 PRRX2Q99811 253 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 SLC2A4RGQ9NR83 387 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 B4GALT6Q9UBX8 382 aa5.89□□□□□ -1.47
CHMP2B-202ENST00000466696 DNAJC8O75937 253 aaPredicted RBP5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 TOX4O94842 621 aa5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 JUNP05412 331 aaKnown RBP5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 PIK3R6Q5UE93 754 aa5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 MRGPRGQ86SM5 289 aa5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 GPR87Q9BY21 358 aa5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 HAPLN2Q9GZV7 340 aa5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 CDK11AQ9UQ88 783 aaPredicted RBP5.88□□□□□ -1.47
CHMP2B-202ENST00000466696 PTX3P26022 381 aaPredicted RBP5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 ZNF460Q14592 562 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 FKBP15Q5T1M5 1219 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 PHYKPLQ8IUZ5 450 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 ULK2Q8IYT8 1036 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 C7orf31Q8N865 590 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 C14orf93Q9H972 538 aaKnown RBP5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 DNAI1Q9UI46 699 aa5.87□□□□□ -1.47
CHMP2B-202ENST00000466696 XDHP47989 1333 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 CBX4O00257 560 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 MFAP3LO75121 409 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 IPO13O94829 963 aaKnown RBP5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 PTGS2P35354 604 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 SLC25A3Q00325 362 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 ADCY2Q08462 1091 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 TOB2Q14106 344 aaPredicted RBP5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 MAN2A1Q16706 1144 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 ARL8AQ96BM9 186 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 DNAJC2Q99543 621 aaKnown RBP5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 PITHD1Q9GZP4 211 aaPredicted RBP5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 PODXL2Q9NZ53 605 aa5.86□□□□□ -1.47
CHMP2B-202ENST00000466696 A0A0A6YYJ9 748 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 GOLGA6L6A8MZA4 724 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 RAMP2O60895 175 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 JMJD7P0C870 316 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 SLC9A1P19634 815 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 KIR2DL3P43628 341 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 NPEPPSP55786 919 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 SQSTM1Q13501 440 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 CDCA2Q69YH5 1023 aaPredicted RBP5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 KANSL1Q7Z3B3 1105 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 ZZZ3Q8IYH5 903 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 CMTM4Q8IZR5 234 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 ELF4Q99607 663 aaPredicted RBP5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 OSBPL6Q9BZF3 934 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 SPO11Q9Y5K1 396 aa5.85□□□□□ -1.47
CHMP2B-202ENST00000466696 TMEM191CA6NGB0 347 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 MTSS1O43312 755 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 RFPL3O75679 317 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 PRPF6O94906 941 aaKnown RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 FSBPO95073 299 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 HNRNPLP14866 589 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 RABGGTBP53611 331 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 BMS1Q14692 1282 aaKnown RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 KIAA1841Q6NSI8 718 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 ESRP1Q6NXG1 681 aaKnown RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 HTR3DQ70Z44 454 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 ELOA2Q8IYF1 753 aaPredicted RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 ATXN2LQ8WWM7 1075 aaKnown RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 HAS1Q92839 578 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 ZNF512Q96ME7 567 aaPredicted RBP5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 MNTQ99583 582 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 MTG2Q9H4K7 406 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 GPRC5BQ9NZH0 403 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 NCDNQ9UBB6 729 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 DMRT1Q9Y5R6 373 aa5.84□□□□□ -1.47
CHMP2B-202ENST00000466696 KLRG2A4D1S0 409 aaPredicted RBP5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 APOL3O95236 402 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 SDSP20132 328 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 SPIDRQ14159 915 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 RABL3Q5HYI8 236 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 MDGA1Q8NFP4 955 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 SH3TC2Q8TF17 1288 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 SLC25A43Q8WUT9 341 aaPredicted RBP5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 UIMC1Q96RL1 719 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 ORAI3Q9BRQ5 295 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 MYL10Q9BUA6 226 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 NRDE2Q9H7Z3 1164 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 TOMM22Q9NS69 142 aa5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 INTS7Q9NVH2 962 aaKnown RBP5.83□□□□□ -1.48
CHMP2B-202ENST00000466696 OXSMQ9NWU1 459 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms