RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SALL3Q9BXA9 1300 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SSU72P8A0A1W2PR75 194 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 TCRBV5S4A2TA0A5A2 114 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 GOLIM4O00461 696 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 TNFRSF10CO14798 259 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SIGLEC6O43699 453 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 NRDCO43847 1150 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 FKTNO75072 461 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 RAB11FIP3O75154 756 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SEMA7AO75326 666 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 HMMRO75330 724 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 IDH1O75874 414 aaKnown RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 TBC1D8O95759 1140 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 IFIT2P09913 472 aaKnown RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 NME1P15531 152 aaKnown RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 CCNFP41002 786 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 TM4SF4P48230 202 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 CTCFP49711 727 aaPredicted RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 ZNF165P49910 485 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 HSP90AB4PQ58FF6 505 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SPTY2D1Q68D10 685 aaPredicted RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 NAA16Q6N069 864 aaPredicted RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 CEP128Q6ZU80 1094 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 CLASRPQ8N2M8 674 aaKnown RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 MAGEB6Q8N7X4 407 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 NKD1Q969G9 470 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 OPTNQ96CV9 577 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 EAF1Q96JC9 268 aaPredicted RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 WRNIP1Q96S55 665 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 DNAJC2Q99543 621 aaKnown RBP5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 SGPP1Q9BX95 441 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 NT5C1AQ9BXI3 368 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 LRRCC1Q9C099 1032 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 DNAJC18Q9H819 358 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 ZNF112Q9UJU3 913 aa5.82□□□□□ -1.48
EXOSC3-204ENST00000465860 MEIS3P2A8K0S8 358 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 ENTPD3O75355 529 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 MAP4K4O95819 1239 aaPredicted RBP5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 PDE6AP16499 860 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 ATP5JP18859 108 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 MOGSQ13724 837 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 ADGRF1Q5T601 910 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 MAPKAPK5Q8IW41 473 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 TEX11Q8IYF3 940 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 ANKRD13AQ8IZ07 590 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 TGFBRAP1Q8WUH2 860 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 BRI3BPQ8WY22 251 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 SLC6A18Q96N87 628 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 RIOK1Q9BRS2 568 aaKnown RBP5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 OSBPL5Q9H0X9 879 aaPredicted RBP5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 CHST7Q9NS84 486 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 TMOD2Q9NZR1 351 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 SAP30BPQ9UHR5 308 aaKnown RBP5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
EXOSC3-204ENST00000465860 LOC285556D6RIA3 1793 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 TNRC18O15417 2968 aaPredicted RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 FLT1P17948 1338 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 ZNF532Q9HCE3 1301 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 MGAMO43451 1857 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 COL2A1P02458 1487 aaPredicted RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 OR14I1A6ND48 311 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 MEIS1O00470 390 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 PRKAB2O43741 272 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 LDHCP07864 332 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 ZBTB48P10074 688 aaPredicted RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 GSTO1P78417 241 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 LRRFIP1Q32MZ4 808 aaKnown RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 SLC9C2Q5TAH2 1124 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 TTLL10Q6ZVT0 673 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 FAM43AQ8N2R8 423 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 LCORLQ8N3X6 602 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 TMEM87AQ8NBN3 555 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 SLC9A7Q96T83 725 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 HAUS7Q99871 368 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 SPON2Q9BUD6 331 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 ZNF341Q9BYN7 854 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 CHMP4BQ9H444 224 aaKnown RBP5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 PAG1Q9NWQ8 432 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 GFOD1Q9NXC2 390 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 DOCK3Q8IZD9 2030 aa5.8□□□□□ -1.48
EXOSC3-204ENST00000465860 CYP2D7A0A087X1C5 515 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CCL15-CCL14A0A0B4J2E2 113 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 UNCXA6NJT0 531 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 FADS2P1A8MWK0 482 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CYP2D6P10635 497 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 SDHBP21912 280 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 ADD2P35612 726 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CTSKP43235 329 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 PLCD1P51178 756 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CRHR2Q13324 411 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 HDAC1Q13547 482 aaPredicted RBP5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 KIR3DS1Q14943 382 aa5.79□□□□□ -1.48
EXOSC3-204ENST00000465860 CCL15Q16663 113 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms