RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870		M0QZ92	97 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	HIP1R	O75146	1068 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	MYL1	P05976	194 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	LRIT3	Q3SXY7	679 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	NT5DC1	Q5TFE4	455 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	IER5	Q5VY09	327 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	CNNM4	Q6P4Q7	775 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	SASS6	Q6UVJ0	657 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	UNC13D	Q70J99	1090 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	HERVK_113	Q902F9	699 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	FUCA2	Q9BTY2	467 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	GPRC5C	Q9NQ84	441 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	PANK4	Q9NVE7	773 aa		13.64	□□□□□ -0.23
PTPN7-205	ENST00000464870	ZBBX	A8MT70	800 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	NBN	O60934	754 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	C22orf31	O95567	290 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	CXCL10	P02778	98 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	BMP6	P22004	513 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	GUCY2C	P25092	1073 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	TMOD1	P28289	359 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	TYRO3	Q06418	890 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	TBC1D8B	Q0IIM8	1120 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	COASY	Q13057	564 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	MAPK7	Q13164	816 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	MORC3	Q14149	939 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	FAM26D	Q5JW98	314 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	FAM102B	Q5T8I3	360 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	TRAF7	Q6Q0C0	670 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	OTOP2	Q7RTS6	562 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	DAW1	Q8N136	415 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	METTL13	Q8N6R0	699 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	GSDMA	Q96QA5	445 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	XPNPEP1	Q9NQW7	623 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	TBC1D7	Q9P0N9	293 aa		13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	RANBP2	P49792	3224 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-205	ENST00000464870	PVALEF	A0A1B0GWK0	134 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	DGAT1	O75907	488 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	FAM13A	O94988	1023 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	CHRNA1	P02708	482 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	POLG	P54098	1239 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	NLRP12	P59046	1061 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	ZNF445	P59923	1031 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	MRPS6	P82932	125 aa	Known RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	GPNMB	Q14956	572 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	EMC2	Q15006	297 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	EFCAB12	Q6NXP0	572 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	CNKSR3	Q6P9H4	555 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	LRSAM1	Q6UWE0	723 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	SFR1	Q86XK3	245 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	CCDC65	Q8IXS2	484 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	EXOC8	Q8IYI6	725 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	KIAA0319L	Q8IZA0	1049 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	TMEM143	Q96AN5	459 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	VWCE	Q96DN2	955 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	MAP7D2	Q96T17	732 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	JPH2	Q9BR39	696 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	DHX33	Q9H6R0	707 aa	Known RBP	13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	ATP6V0A4	Q9HBG4	840 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	EXOC1	Q9NV70	894 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	KCND2	Q9NZV8	630 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	GDA	Q9Y2T3	454 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	PPME1	Q9Y570	386 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	CDY2A	Q9Y6F7	541 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	LTBP2	Q14767	1821 aa		13.62	□□□□□ -0.23
PTPN7-205	ENST00000464870	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	FRMD3	A2A2Y4	597 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	TBCA	O75347	108 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	MAF	O75444	373 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	BAIAP3	O94812	1187 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	RHOBTB3	O94955	611 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	CCDC192	P0DO97	292 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	RFC5	P40937	340 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	DNM2	P50570	870 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	EHHADH	Q08426	723 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	STK4	Q13043	487 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	MKRN4P	Q13434	485 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	DRP2	Q13474	957 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	IKBKE	Q14164	716 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	MBTPS1	Q14703	1052 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	KCNB1	Q14721	858 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	DPCR1	Q3MIW9	517 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	ZNF710	Q8N1W2	664 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	LRRC71	Q8N4P6	559 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	MYCT1	Q8N699	235 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	GLIS3	Q8NEA6	775 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	BSND	Q8WZ55	320 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	CCDC47	Q96A33	483 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	FGFBP2	Q9BYJ0	223 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	CELF4	Q9BZC1	486 aa	Known RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	SUGCT	Q9HAC7	445 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	SLC39A2	Q9NP94	309 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	RMND1	Q9NWS8	449 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	TRPV2	Q9Y5S1	764 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	SLC4A7	Q9Y6M7	1214 aa		13.61	□□□□□ -0.23
PTPN7-205	ENST00000464870	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.6	□□□□□ -0.23
PTPN7-205	ENST00000464870	EFCAB14	O75071	495 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms