RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 SLC7A6OSQ96CW6 309 aaPredicted RBP8.18□□□□□ -1.1
PTCD3-205ENST00000464541 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 ORAI2Q96SN7 254 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 ANO3Q9BYT9 981 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 TMPRSS11EQ9UL52 423 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 FAM184BQ9ULE4 1060 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 ZNF536O15090 1300 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 XPAP23025 273 aaPredicted RBP8.17□□□□□ -1.1
PTCD3-205ENST00000464541 HGFACQ04756 655 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 RNF151Q2KHN1 245 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 OR14C36Q8NHC7 312 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 GAB3Q8WWW8 586 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 RELTQ969Z4 430 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 NEIL1Q96FI4 390 aaPredicted RBP8.17□□□□□ -1.1
PTCD3-205ENST00000464541 LMF1Q96S06 567 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 MEGF9Q9H1U4 602 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 PPP4R1LQ9P1A2 415 aa8.17□□□□□ -1.1
PTCD3-205ENST00000464541 PUF60Q9UHX1 559 aaKnown RBP8.17□□□□□ -1.1
PTCD3-205ENST00000464541 NOP58Q9Y2X3 529 aaKnown RBP8.17□□□□□ -1.1
PTCD3-205ENST00000464541 A0A0A6YYK5 440 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-205ENST00000464541 NPEPPSL1A6NEC2 478 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 DAPK3O43293 454 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-205ENST00000464541 ITGB3P05106 788 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 NRG3P56975 720 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 ERVK-21P61565 698 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 ADAM15Q13444 863 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 UGT8Q16880 541 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 PITRM1Q5JRX3 1037 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 CCDC62Q6P9F0 684 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 GLB1LQ6UWU2 654 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 CLEC14AQ86T13 490 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 SLC41A1Q8IVJ1 513 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
PTCD3-205ENST00000464541 GCDHQ92947 438 aaPredicted RBP8.16□□□□□ -1.1
PTCD3-205ENST00000464541 PAWRQ96IZ0 340 aaKnown RBP8.16□□□□□ -1.1
PTCD3-205ENST00000464541 SOX7Q9BT81 388 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 SLC6A15Q9H2J7 730 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 PRSS50Q9UI38 385 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 DNAI1Q9UI46 699 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 MAGEL2Q9UJ55 1249 aa8.16□□□□□ -1.1
PTCD3-205ENST00000464541 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 MTHFD2P13995 350 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 CDKN1CP49918 316 aaPredicted RBP8.15□□□□□ -1.1
PTCD3-205ENST00000464541 SPIDRQ14159 915 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 TBR1Q16650 682 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTCD3-205ENST00000464541 GAGE13Q4V321 117 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 LILRA6Q6PI73 481 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 LYSMD2Q8IV50 215 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 GLB1L2Q8IW92 636 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 UNC5BQ8IZJ1 945 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 COG1Q8WTW3 980 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 CFHR4Q92496 578 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 RBM15Q96T37 977 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTCD3-205ENST00000464541 VTA1Q9NP79 307 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 C14orf119Q9NWQ9 140 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 USP18Q9UMW8 372 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 OAZ3Q9UMX2 235 aa8.15□□□□□ -1.1
PTCD3-205ENST00000464541 CLEC2LP0C7M8 214 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 SYN1P17600 705 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 CR2P20023 1033 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 MRPS9P82933 396 aaKnown RBP8.14□□□□□ -1.11
PTCD3-205ENST00000464541 PPARAQ07869 468 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 CIR1Q86X95 450 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-205ENST00000464541 CNTD1Q8N815 330 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 PLA2G15Q8NCC3 412 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 SSBP3Q9BWW4 388 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-205ENST00000464541 KCTD10Q9H3F6 313 aa8.14□□□□□ -1.11
PTCD3-205ENST00000464541 C14orf93Q9H972 538 aaKnown RBP8.14□□□□□ -1.11
PTCD3-205ENST00000464541 MTSS1O43312 755 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 SLC26A4O43511 780 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 ADCY7P51828 1080 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 GUCY2FP51841 1108 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 KLF1Q13351 362 aaPredicted RBP8.13□□□□□ -1.11
PTCD3-205ENST00000464541 CT83Q5H943 113 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 RABGGTAQ92696 567 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 EAF2Q96CJ1 260 aaPredicted RBP8.13□□□□□ -1.11
PTCD3-205ENST00000464541 GPATCH3Q96I76 525 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 BDH2Q9BUT1 245 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 NELFAQ9H3P2 528 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTCD3-205ENST00000464541 CDY2AQ9Y6F7 541 aa8.13□□□□□ -1.11
PTCD3-205ENST00000464541 C2orf78A6NCI8 922 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 MATN2O00339 956 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 FOXD2O60548 495 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-205ENST00000464541 CELA3BP08861 270 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 GAAP10253 952 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 RPS19P39019 145 aaKnown RBP8.12□□□□□ -1.11
PTCD3-205ENST00000464541 SCAND1P57086 179 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 MEF2AQ02078 507 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-205ENST00000464541 TCIRG1Q13488 830 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 TRIM25Q14258 630 aaKnown RBP8.12□□□□□ -1.11
PTCD3-205ENST00000464541 LMBR1LQ6UX01 489 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 TTC9BQ8N6N2 239 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 OR14K1Q8NGZ2 314 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 SAMD11Q96NU1 681 aa8.12□□□□□ -1.11
PTCD3-205ENST00000464541 LRRC37BQ96QE4 947 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms