RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MANFP55145 182 aaKnown RBP5.6□□□□□ -1.51
CLK1-208ENST00000464454 PLEKHG6Q3KR16 790 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 TBC1D10BQ4KMP7 808 aaPredicted RBP5.6□□□□□ -1.51
CLK1-208ENST00000464454 ZBTB41Q5SVQ8 909 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 LARP4Q71RC2 724 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLK1-208ENST00000464454 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
CLK1-208ENST00000464454 RELTQ969Z4 430 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 WDR92Q96MX6 357 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 PTPN22Q9Y2R2 807 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 NR2E1Q9Y466 385 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 PCDHB6Q9Y5E3 794 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 NUMBLQ9Y6R0 609 aa5.6□□□□□ -1.51
CLK1-208ENST00000464454 NPEPPSL1A6NEC2 478 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 DAPK3O43293 454 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 PCDH8O95206 1070 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 PFKMP08237 780 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 SYN1P17600 705 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 XPAP23025 273 aaPredicted RBP5.59□□□□□ -1.51
CLK1-208ENST00000464454 LILRA6Q6PI73 481 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 UNQ6494/PRO21346Q6UXR6 183 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 LMF1Q96S06 567 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 OSBPL6Q9BZF3 934 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 MS4A5Q9H3V2 200 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
CLK1-208ENST00000464454 PPP2R3BQ9Y5P8 575 aa5.59□□□□□ -1.51
CLK1-208ENST00000464454 NCANO14594 1321 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 PRSS38A1L453 326 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 LCHNA4D1U4 455 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 KATNA1O75449 491 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 FSBPO95073 299 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 S100BP04271 92 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 NRG3P56975 720 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 ITKQ08881 620 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 ADAM15Q13444 863 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 FSCN1Q16658 493 aaKnown RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 GCDHQ92947 438 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 NKD2Q969F2 451 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 SLC7A6OSQ96CW6 309 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 NEIL1Q96FI4 390 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 AHCYL2Q96HN2 611 aaKnown RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 BDH2Q9BUT1 245 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 ANO3Q9BYT9 981 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 TOPORSQ9NS56 1045 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 OAZ3Q9UMX2 235 aa5.58□□□□□ -1.52
CLK1-208ENST00000464454 CTDP1Q9Y5B0 961 aaPredicted RBP5.58□□□□□ -1.52
CLK1-208ENST00000464454 PMS2P1A4D2B8 440 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 PRRG2O14669 202 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 ITGB3P05106 788 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 ENPP1P22413 925 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 ANTXR2P58335 489 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 PLP2Q04941 152 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 UGT8Q16880 541 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 CCDC62Q6P9F0 684 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 CIR1Q86X95 450 aaPredicted RBP5.57□□□□□ -1.52
CLK1-208ENST00000464454 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 OR14C36Q8NHC7 312 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 GAB3Q8WWW8 586 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 RAX2Q96IS3 184 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 PPP4R1LQ9P1A2 415 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 DNAI1Q9UI46 699 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 MAGEL2Q9UJ55 1249 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 USP18Q9UMW8 372 aa5.57□□□□□ -1.52
CLK1-208ENST00000464454 WASHC2AQ641Q2 1341 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 GOLGA8AA7E2F4 631 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 GOLGA8BA8MQT2 603 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 K7ESF4 209 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 K7ESM1 405 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 FOXD2O60548 495 aaPredicted RBP5.56□□□□□ -1.52
CLK1-208ENST00000464454 PRKD3O94806 890 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 CELA3BP08861 270 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 CR2P20023 1033 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 PPARAQ07869 468 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 MTMR1Q13613 665 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 SPIDRQ14159 915 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 PDCD1Q15116 288 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.56□□□□□ -1.52
CLK1-208ENST00000464454 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 LMBR1LQ6UX01 489 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 GLB1L2Q8IW92 636 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 OR14K1Q8NGZ2 314 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 COG1Q8WTW3 980 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 PAWRQ96IZ0 340 aaKnown RBP5.56□□□□□ -1.52
CLK1-208ENST00000464454 LRRC37BQ96QE4 947 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 MENTQ9BUN1 341 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 SLC6A15Q9H2J7 730 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 C12orf65Q9H3J6 166 aaKnown RBP5.56□□□□□ -1.52
CLK1-208ENST00000464454 C14orf93Q9H972 538 aaKnown RBP5.56□□□□□ -1.52
CLK1-208ENST00000464454 PRSS50Q9UI38 385 aa5.56□□□□□ -1.52
CLK1-208ENST00000464454 B8ZZF3 427 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 SLC26A4O43511 780 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 CDC14BO60729 498 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 SEC24DO94855 1032 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms