RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 CLEC14AQ86T13 490 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 PHYKPLQ8IUZ5 450 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 ZZZ3Q8IYH5 903 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 C7orf31Q8N865 590 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 ELF4Q99607 663 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-208ENST00000464001 TCF25Q9BQ70 676 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 INTS7Q9NVH2 962 aaKnown RBP6.14□□□□□ -1.43
ITGB1-208ENST00000464001 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 SPO11Q9Y5K1 396 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 UBE2QL1A1L167 161 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 PEX11BO96011 259 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 ADH4P08319 380 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 VSIG10L2P0DP72 767 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 MAKP20794 623 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 ADAM8P78325 824 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 CNGB1Q14028 1251 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-208ENST00000464001 MYBPC3Q14896 1274 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 ZNF483Q8TF39 744 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-208ENST00000464001 KANSL2Q9H9L4 492 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 IL23AQ9NPF7 189 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 TOMM22Q9NS69 142 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 CEP72Q9P209 647 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 HECAQ9UBI9 543 aaPredicted RBP6.13□□□□□ -1.43
ITGB1-208ENST00000464001 DNAI1Q9UI46 699 aa6.13□□□□□ -1.43
ITGB1-208ENST00000464001 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
ITGB1-208ENST00000464001 LOC105371045A0A1W2PR82 267 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 PRPF6O94906 941 aaKnown RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 JUNP05412 331 aaKnown RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 MAN2A2P49641 1150 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 PURAQ00577 322 aaKnown RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 DPTQ07507 201 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 ELAVL1Q15717 326 aaKnown RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 MAN2A1Q16706 1144 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 KANSL1Q7Z3B3 1105 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 KIF18BQ86Y91 864 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 ORAI3Q9BRQ5 295 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 OXSMQ9NWU1 459 aa6.12□□□□□ -1.43
ITGB1-208ENST00000464001 REXO2Q9Y3B8 237 aaKnown RBP6.12□□□□□ -1.43
ITGB1-208ENST00000464001 A0A0A6YYJ9 748 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 GAS7O60861 476 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 TOX4O94842 621 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 APOL3O95236 402 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 TCEA2Q15560 299 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 CCDC144BQ3MJ40 725 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 CRB2Q5IJ48 1285 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 FNDC7Q5VTL7 733 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 MFSD5Q6N075 450 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 KIAA1841Q6NSI8 718 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 ESRP1Q6NXG1 681 aaKnown RBP6.11□□□□□ -1.43
ITGB1-208ENST00000464001 PASD1Q8IV76 773 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 UBXN4Q92575 508 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 OSBPL6Q9BZF3 934 aa6.11□□□□□ -1.43
ITGB1-208ENST00000464001 PITHD1Q9GZP4 211 aaPredicted RBP6.11□□□□□ -1.43
ITGB1-208ENST00000464001 C14orf93Q9H972 538 aaKnown RBP6.11□□□□□ -1.43
ITGB1-208ENST00000464001 OVOL3O00110 214 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 MFAP3LO75121 409 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 ATP2A2P16615 1042 aaKnown RBP6.1□□□□□ -1.43
ITGB1-208ENST00000464001 KIR2DL3P43628 341 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 SCNN1GP51170 649 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 NEK4P51957 841 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 SMAD3P84022 425 aaKnown RBP6.1□□□□□ -1.43
ITGB1-208ENST00000464001 CREB3L3Q68CJ9 461 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 Q6ZRM9 215 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 HOMER1Q86YM7 354 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 CMTM4Q8IZR5 234 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 ARL8AQ96BM9 186 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 MYL10Q9BUA6 226 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 MTG2Q9H4K7 406 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 NCDNQ9UBB6 729 aa6.1□□□□□ -1.43
ITGB1-208ENST00000464001 FSBPO95073 299 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 HNRNPLP14866 589 aaKnown RBP eCLIP6.09□□□□□ -1.43
ITGB1-208ENST00000464001 CD40P25942 277 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 INHBCP55103 352 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 RTF1Q92541 710 aaKnown RBP6.09□□□□□ -1.43
ITGB1-208ENST00000464001 HIST1H2AHQ96KK5 128 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 UIMC1Q96RL1 719 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 CEP89Q96ST8 783 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 HIST1H2AJQ99878 128 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 NOL10Q9BSC4 688 aaKnown RBP6.09□□□□□ -1.43
ITGB1-208ENST00000464001 GPR87Q9BY21 358 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
ITGB1-208ENST00000464001 XDHP47989 1333 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 GOLGA6L6A8MZA4 724 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 MTSS1O43312 755 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 OPHN1O60890 802 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 IPO13O94829 963 aaKnown RBP6.08□□□□□ -1.44
ITGB1-208ENST00000464001 F2P00734 622 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 NPEPPSP55786 919 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 EFHBQ8N7U6 833 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 CLIP3Q96DZ5 547 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms