RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
MSH5-211ENST00000463144 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
MSH5-211ENST00000463144 PFASO15067 1338 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 ICAM3P32942 547 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 NPTX2P47972 431 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 BFSP1Q12934 665 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 PPP2R5AQ15172 486 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 STXBP2Q15833 593 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 PLEKHO2Q8TD55 490 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 CDCA5Q96FF9 252 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 SPATC1LQ9H0A9 340 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 XPNPEP1Q9NQW7 623 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 ANKRD63C9JTQ0 380 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 EIF3JO75822 258 aaKnown RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 ATP4AP20648 1035 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 PRKCIP41743 596 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 MOGSQ13724 837 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 LMO3Q8TAP4 145 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 ATP6V0A1Q93050 837 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
MSH5-211ENST00000463144 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
MSH5-211ENST00000463144 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 MYH9P35579 1960 aaKnown RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 ANO9A1A5B4 782 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ATG7O95352 703 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ADSSP30520 456 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 PRKCEQ02156 737 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ANKRD13AQ8IZ07 590 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
MSH5-211ENST00000463144 PACSIN1Q9BY11 444 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ANKZF1Q9H8Y5 726 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 TBX20Q9UMR3 447 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 IGSF9BQ9UPX0 1349 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 CXCL11O14625 94 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ZNF185O15231 689 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 LRRN2O75325 713 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 TACC1O75410 805 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 EDNRBP24530 442 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 PPP3CAQ08209 521 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 SEPT14Q6ZU15 432 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 NOA1Q8NC60 698 aaKnown RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 TRIM58Q8NG06 486 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 OLIG1Q8TAK6 271 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 MMS19Q96T76 1030 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 GPR88Q9GZN0 384 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 INTS2Q9H0H0 1204 aaKnown RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 TXNRD2Q9NNW7 524 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 CYP26B1Q9NR63 512 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 SEPT9Q9UHD8 586 aaPredicted RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 DDX41Q9UJV9 622 aaKnown RBP11.09□□□□□ -0.63
MSH5-211ENST00000463144 NENFQ9UMX5 172 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
MSH5-211ENST00000463144 ADGRA3Q8IWK6 1321 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 LRRC37A2A6NM11 1700 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 PDE2AO00408 941 aaPredicted RBP11.08□□□□□ -0.64
MSH5-211ENST00000463144 BUB1O43683 1085 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSH5-211ENST00000463144 KLRC1P26715 233 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 EPHX2P34913 555 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 VAMP7P51809 220 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 MCCD1P59942 119 aaPredicted RBP11.08□□□□□ -0.64
MSH5-211ENST00000463144 Q3C1V9 767 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 MIS18BP1Q6P0N0 1132 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
MSH5-211ENST00000463144 DNAAF5Q86Y56 855 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 MAP4K3Q8IVH8 894 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 KIFAP3Q92845 792 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 KMT5AQ9NQR1 393 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 JRKLQ9Y4A0 524 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 EMSYQ7Z589 1322 aa11.08□□□□□ -0.64
MSH5-211ENST00000463144 DENND3A2RUS2 1198 aa11.07□□□□□ -0.64
MSH5-211ENST00000463144 CTAGE15A4D2H0 777 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms