RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 CARNS1A5YM72 827 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 H3BQ06 376 aaPredicted RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 JAK2O60674 1132 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 ZNF623O75123 536 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 CSDE1O75534 798 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 FGF18O76093 207 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LYPLA2O95372 231 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 FGFR1P11362 822 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LAG3P18627 525 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 FGFR4P22455 802 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 SFPQP23246 707 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 DNAJB1P25685 340 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 YWHABP31946 246 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LTBRP36941 435 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 POLGP54098 1239 aaPredicted RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 HMGN5P82970 282 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 KRT17Q04695 432 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 POU5F1BQ06416 359 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 HYAL1Q12794 435 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 XKR9Q5GH70 373 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 PLA2G4FQ68DD2 849 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 NCAPH2Q6IBW4 605 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LRRC55Q6ZSA7 311 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 EP400NLQ6ZTU2 488 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 SRGAP1Q7Z6B7 1085 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 ZNF598Q86UK7 904 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 POTEDQ86YR6 584 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 ZNF579Q8NAF0 562 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 COLGALT1Q8NBJ5 622 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 MICAL1Q8TDZ2 1067 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 PRPF31Q8WWY3 499 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 PSPC1Q8WXF1 523 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 DYDC2Q96IM9 177 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 MTMR9Q96QG7 549 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LXNQ9BS40 222 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 C1QTNF1Q9BXJ1 281 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 IGFLR1Q9H665 355 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 TTC12Q9H892 705 aaPredicted RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 SH2B1Q9NRF2 756 aaPredicted RBP8.14□□□□□ -1.11
PTPRF-210ENST00000463041 ANKEF1Q9NU02 776 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 RNF19AQ9NV58 838 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 PRKAG3Q9UGI9 489 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 COL4A3BPQ9Y5P4 624 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 PLXNA4Q9HCM2 1894 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 MYO10Q9HD67 2058 aa8.14□□□□□ -1.11
PTPRF-210ENST00000463041 TRIOO75962 3097 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 FAM205CA6NFA0 338 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 NEMFO60524 1076 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 SRGAP2CP0DJJ0 459 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 PPM1AP35813 382 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 TXKP42681 527 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 PHKA2P46019 1235 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 RAB27AP51159 221 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 LAMTOR4Q0VGL1 99 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 ORC2Q13416 577 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 CTTNQ14247 550 aaKnown RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 MXD4Q14582 209 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 PCBP1Q15365 356 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 TWF2Q6IBS0 349 aaKnown RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 KCNT2Q6UVM3 1135 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 CATSPER4Q7RTX7 472 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 CCDC83Q8IWF9 413 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 GJD3Q8N144 294 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 EFHBQ8N7U6 833 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 FBXO18Q8NFZ0 1043 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 MRPS27Q92552 414 aaKnown RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 TMEM143Q96AN5 459 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 PGBD4Q96DM1 585 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 C8orf76Q96K31 380 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 NLRP4Q96MN2 994 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 ZNF558Q96NG5 402 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 CDCA3Q99618 268 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 KIF2CQ99661 725 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 MRPL9Q9BYD2 267 aaKnown RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 FOXP1Q9H334 677 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 TLE6Q9H808 572 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 IFT122Q9HBG6 1241 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 TLR9Q9NR96 1032 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 SPG21Q9NZD8 308 aa8.13□□□□□ -1.11
PTPRF-210ENST00000463041 WRAP73Q9P2S5 460 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-210ENST00000463041 PI4K2BG5E9Z4 385 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 ZBTB39O15060 712 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 DGAT1O75907 488 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 EYA4O95677 639 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 IL9P15248 144 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 AXLP30530 894 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 GTF2F1P35269 517 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 IRS1P35568 1242 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 ALDH7A1P49419 539 aaKnown RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 ERVFC1P60507 584 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 CYP4A11Q02928 519 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 DLX2Q07687 328 aaPredicted RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 NCBP1Q09161 790 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 466.6 ms