RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 FBLN5Q9UBX5 448 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 TPCN1Q9ULQ1 816 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 LRCH1Q9Y2L9 728 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 PCDHB1Q9Y5F3 818 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 U3KQE9 123 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 hCG_1984214I3L0E3 225 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ACOT7O00154 380 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 A1BGP04217 495 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ABCB4P21439 1286 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 BCL6P41182 706 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 FAM26EQ8N5C1 309 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ACRBPQ8NEB7 543 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ZMIZ2Q8NF64 920 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 ASIC4Q96FT7 647 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 STK31Q9BXU1 1019 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 PRDM5Q9NQX1 630 aaPredicted RBP3.65□□□□□ -1.82
SMC4-203ENST00000462668 BLOC1S4Q9NUP1 217 aa3.65□□□□□ -1.82
SMC4-203ENST00000462668 NXF1Q9UBU9 619 aaKnown RBP3.65□□□□□ -1.82
SMC4-203ENST00000462668 NACADO15069 1562 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 F8W8V4 182 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TMEM63AO94886 807 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TYRP14679 529 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 KIF23Q02241 960 aaPredicted RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 NRN1LQ496H8 165 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TTLL7Q6ZT98 887 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 SUGP1Q8IWZ8 645 aaKnown RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 OR2I1PQ8NGU4 316 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 PHOSPHO1Q8TCT1 267 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FATE1Q969F0 183 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FCRL2Q96LA5 508 aaPredicted RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 LRRC27Q9C0I9 530 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TM7SF3Q9NS93 570 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 ASH2LQ9UBL3 628 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FAM155AB1AL88 458 aaPredicted RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 KCNQ3O43525 872 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 DTNBO60941 627 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 CD4P01730 458 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 PNLIPP16233 465 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 EN2P19622 333 aaPredicted RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 PPM1FP49593 454 aaPredicted RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 CT83Q5H943 113 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FAM209BQ5JX69 171 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 C1QTNF12Q5T7M4 302 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TSHZ3Q63HK5 1081 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FAM20CQ8IXL6 584 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 CCDC89Q8N998 374 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 GALNT6Q8NCL4 622 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 ASB15Q8WXK1 588 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 NMD3Q96D46 503 aaKnown RBP3.65□□□□□ -1.83
SMC4-203ENST00000462668 MAGEH1Q9H213 219 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 CRYL1Q9Y2S2 319 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 TMX2Q9Y320 296 aa3.65□□□□□ -1.83
SMC4-203ENST00000462668 FADS2P1A8MWK0 482 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 APPP05067 770 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 PRKG2Q13237 762 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 TUSC3Q13454 348 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 ACAP2Q15057 778 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 STILQ15468 1287 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 ZACNQ401N2 412 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 MROH9Q5TGP6 573 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CPOQ8IVL8 374 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 PAF1Q8N7H5 531 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 NRG4Q8WWG1 115 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 JAM3Q9BX67 310 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.64□□□□□ -1.835e-8■■■□□ 16.4
SMC4-203ENST00000462668 CATSPERZQ9NTU4 200 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CLDND1Q9NY35 253 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 GRHPRQ9UBQ7 328 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 A0A0A6YYJ9 748 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CDC14CA4D256 554 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 PHGDHO43175 533 aaKnown RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 RPS6KB1P23443 525 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 AOAHP28039 575 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 SLC16A1P53985 500 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 FMO1Q01740 532 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 NOGQ13253 232 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CNGB1Q14028 1251 aaPredicted RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 FBXO47Q5MNV8 452 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 GJC2Q5T442 439 aaPredicted RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 BTNL9Q6UXG8 535 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CATSPERGQ6ZRH7 1159 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 SKAP1Q86WV1 359 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CILP2Q8IUL8 1156 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 GPATCH11Q8N954 259 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 KBTBD7Q8WVZ9 684 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 RMDN3Q96TC7 470 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 DDX23Q9BUQ8 820 aaKnown RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 TWSG1Q9GZX9 223 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CALCOCO1Q9P1Z2 691 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 ATP23Q9Y6H3 246 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 NOTOA8MTQ0 251 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 MYO1BO43795 1136 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 NPHS1O60500 1241 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 MGEA5O60502 916 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 CELA2BP08218 269 aaPredicted RBP3.64□□□□□ -1.83
SMC4-203ENST00000462668 NFICP08651 508 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 GSTM1P09488 218 aa3.64□□□□□ -1.83
SMC4-203ENST00000462668 TMEM253P0C7T8 217 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms