RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
PCCB-203ENST00000462542 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
PCCB-203ENST00000462542 FAM167AQ96KS9 214 aa13.21□□□□□ -0.29
PCCB-203ENST00000462542 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
PCCB-203ENST00000462542 EMILIN2Q9BXX0 1053 aa13.21□□□□□ -0.29
PCCB-203ENST00000462542 DNAH14Q0VDD8 3507 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
PCCB-203ENST00000462542 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 CYP3A4P08684 503 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
PCCB-203ENST00000462542 CLCN3P51790 818 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
PCCB-203ENST00000462542 LINC01465Q8N7H1 131 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
PCCB-203ENST00000462542 DPP7Q9UHL4 492 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
PCCB-203ENST00000462542 MED19A0JLT2 244 aaPredicted RBP13.19□□□□□ -0.3
PCCB-203ENST00000462542 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 SGSM2O43147 1006 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 ZC3H11AO75152 810 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCCB-203ENST00000462542 GALTP07902 379 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 RXRAP19793 462 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 RFX1P22670 979 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 KLRC2P26717 231 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 PHKA2P46019 1235 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 GPC3P51654 580 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 TBC1D8BQ0IIM8 1120 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 GLB1LQ6UWU2 654 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 KIAA2013Q8IYS2 634 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 AUTS2Q8WXX7 1259 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 RUBCNQ92622 972 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 PGBD1Q96JS3 809 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
PCCB-203ENST00000462542 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
PCCB-203ENST00000462542 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 CLCN4P51793 760 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 SGMS1Q86VZ5 419 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 CMASQ8NFW8 434 aaPredicted RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 STAMQ92783 540 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 KLHL5Q96PQ7 755 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 GABBR1Q9UBS5 961 aa13.18□□□□□ -0.3
PCCB-203ENST00000462542 RBM8AQ9Y5S9 174 aaKnown RBP13.18□□□□□ -0.3
PCCB-203ENST00000462542 IGLV3-22A0A075B6J6 115 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 LILRB3O75022 631 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 ZNF623O75123 536 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 ALDH2P05091 517 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
PCCB-203ENST00000462542 SDHBP21912 280 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 RNASELQ05823 741 aaKnown RBP13.17□□□□□ -0.3
PCCB-203ENST00000462542 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 NOMO2Q5JPE7 1267 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 TMEM173Q86WV6 379 aaPredicted RBP13.17□□□□□ -0.3
PCCB-203ENST00000462542 SLC44A3Q8N4M1 653 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 NRDE2Q9H7Z3 1164 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 WDR6Q9NNW5 1121 aaKnown RBP13.17□□□□□ -0.3
PCCB-203ENST00000462542 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 SSX2IPQ9Y2D8 614 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 R4GN57 208 aa13.17□□□□□ -0.3
PCCB-203ENST00000462542 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
PCCB-203ENST00000462542 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 KRBA1A5PL33 1030 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 OFD1O75665 1012 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 OATP04181 439 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 CFHP08603 1231 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
PCCB-203ENST00000462542 SRFP11831 508 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
PCCB-203ENST00000462542 DNM2P50570 870 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 RAB27AP51159 221 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 TWF2Q6IBS0 349 aaKnown RBP13.16□□□□□ -0.3
PCCB-203ENST00000462542 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 MRPL17Q9NRX2 175 aaKnown RBP13.16□□□□□ -0.3
PCCB-203ENST00000462542 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 EPS15L1Q9UBC2 864 aa13.16□□□□□ -0.3
PCCB-203ENST00000462542 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
PCCB-203ENST00000462542 WDR64B1ANS9 1081 aa13.15□□□□□ -0.3
PCCB-203ENST00000462542 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms