RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	AFAP1L1	Q8TED9	768 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	CBWD1	Q9BRT8	395 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	IRX2	Q9BZI1	471 aa	Predicted RBP	27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	GAN	Q9H2C0	597 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	PCIF1	Q9H4Z3	704 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	PLCB1	Q9NQ66	1216 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	ARHGAP20	Q9P2F6	1191 aa		27.84	■■■□□ 2.05
CDH23-208	ENST00000461841	DENND3	A2RUS2	1198 aa		27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	PLEK	P08567	350 aa	Predicted RBP	27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	PON1	P27169	355 aa		27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	GNG11	P61952	73 aa		27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	SNRPF	P62306	86 aa	Known RBP	27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	WDR24	Q96S15	920 aa		27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	CEP89	Q96ST8	783 aa		27.83	■■■□□ 2.05
CDH23-208	ENST00000461841	ASB14	A6NK59	587 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	POLG	P54098	1239 aa	Predicted RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	EMC2	Q15006	297 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	HSDL1	Q3SXM5	330 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	MAP4K3	Q8IVH8	894 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	RDH13	Q8NBN7	331 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	HVCN1	Q96D96	273 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	DHX33	Q9H6R0	707 aa	Known RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	GTPBP10	A4D1E9	387 aa	Known RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ABL1	P00519	1130 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ACTN1	P12814	892 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ADORA2A	P29274	412 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	CYLC1	P35663	651 aa	Predicted RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	PPP2R5A	Q15172	486 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ZNF792	Q3KQV3	632 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	FAM160B1	Q5W0V3	765 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	GPR20	Q99678	358 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	POLR3F	Q9H1D9	316 aa	Predicted RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	NUCKS1	Q9H1E3	243 aa	Known RBP	27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ADGRA3	Q8IWK6	1321 aa		27.82	■■■□□ 2.04
CDH23-208	ENST00000461841	ARHGAP25	P42331	645 aa		27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	GBP6	Q6ZN66	633 aa		27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	SYN2	Q92777	582 aa	Predicted RBP	27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	CCDC42	Q96M95	316 aa		27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	HSPBP1	Q9NZL4	362 aa		27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	EXOC7	Q9UPT5	735 aa		27.81	■■■□□ 2.04
CDH23-208	ENST00000461841	EIF3CL	B5ME19	914 aa	Known RBP	27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ITGBL1	O95965	494 aa	Predicted RBP	27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	TARBP2	Q15633	366 aa	Known RBP	27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ARHGAP29	Q52LW3	1261 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ARMCX2	Q7L311	632 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	EIF3C	Q99613	913 aa	Known RBP	27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	PDGFC	Q9NRA1	345 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	NRBP2	Q9NSY0	501 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	STRN	O43815	780 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ADSS	P30520	456 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	BFSP1	Q12934	665 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	TMEM63B	Q5T3F8	832 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	KLHDC7A	Q5VTJ3	777 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ABRA	Q8N0Z2	381 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	XXYLT1	Q8NBI6	393 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	IFT74	Q96LB3	600 aa		27.8	■■■□□ 2.04
CDH23-208	ENST00000461841	ANKRD63	C9JTQ0	380 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	TXN	P10599	105 aa	Known RBP	27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	CNGA1	P29973	690 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	FMO5	P49326	533 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	KRT83	P78385	493 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	DHX37	Q8IY37	1157 aa	Known RBP	27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	TMEM143	Q96AN5	459 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	AZI2	Q9H6S1	392 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	GCNT4	Q9P109	453 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	TLR2	O60603	784 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	UCHL3	P15374	230 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	HGSNAT	Q68CP4	663 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	ZSWIM2	Q8NEG5	633 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	SLC7A3	Q8WY07	619 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	PARK7	Q99497	189 aa	Known RBP	27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	ARHGAP28	Q9P2N2	729 aa		27.79	■■■□□ 2.04
CDH23-208	ENST00000461841	NOP56	O00567	594 aa	Known RBP	27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	TRIM49	P0CI25	452 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	TRIM49C	P0CI26	452 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	SFMBT2	Q5VUG0	894 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	INTS8	Q75QN2	995 aa	Known RBP	27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	GPIHBP1	Q8IV16	184 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	COPS5	Q92905	334 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	SPATA33	Q96N06	139 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	L2HGDH	Q9H9P8	463 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	SIX2	Q9NPC8	291 aa		27.78	■■■□□ 2.04
CDH23-208	ENST00000461841	KIF5C	O60282	957 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	LGR5	O75473	907 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	EIF4A3	P38919	411 aa	Known RBP	27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	TTLL4	Q14679	1199 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	CBWD6	Q4V339	395 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	CBWD3	Q5JTY5	395 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	CBWD5	Q5RIA9	395 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	SCFD2	Q8WU76	684 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	IVNS1ABP	Q9Y6Y0	642 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	PLXNB2	O15031	1838 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	ZNF263	O14978	683 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	RFC5	P40937	340 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	HUNK	P57058	714 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	GLG1	Q92896	1179 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	AIPL1	Q9NZN9	384 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	KCNG1	Q9UIX4	513 aa		27.77	■■■□□ 2.04
CDH23-208	ENST00000461841	MAPK13	O15264	365 aa		27.76	■■■□□ 2.03
CDH23-208	ENST00000461841	KRT13	P13646	458 aa		27.76	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms