RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KCNC3Q14003 757 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 CBX2Q14781 532 aaPredicted RBP20.07■□□□□ 0.8
SSB-206ENST00000461708 INF2Q27J81 1249 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 MTERF2Q49AM1 385 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 CLLU1OSQ5K130 101 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 RNF135Q8IUD6 432 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
SSB-206ENST00000461708 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
SSB-206ENST00000461708 KCNMB3Q9NPA1 279 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 SPG21Q9NZD8 308 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 BARX2Q9UMQ3 279 aaPredicted RBP20.07■□□□□ 0.8
SSB-206ENST00000461708 PPME1Q9Y570 386 aa20.07■□□□□ 0.8
SSB-206ENST00000461708 TBX3O15119 743 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 TECTAO75443 2155 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 SKIP12755 728 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 SFPQP23246 707 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSB-206ENST00000461708 EXOC8Q8IYI6 725 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
SSB-206ENST00000461708 KCNH6Q9H252 994 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 VAV3Q9UKW4 847 aa20.06■□□□□ 0.8
SSB-206ENST00000461708 USP15Q9Y4E8 981 aaPredicted RBP20.06■□□□□ 0.8
SSB-206ENST00000461708 CCDC194A0A1B0GVG4 234 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 PER2O15055 1255 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 PFKFB2O60825 505 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 HOXD11P31277 338 aaPredicted RBP20.05■□□□□ 0.8
SSB-206ENST00000461708 QARSP47897 775 aaKnown RBP20.05■□□□□ 0.8
SSB-206ENST00000461708 ANAPC15P60006 121 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 SCRN1Q12765 414 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 ANO5Q75V66 913 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 NEK8Q86SG6 692 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 VN1R2Q8NFZ6 395 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 SUSD6Q92537 303 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 ZNF668Q96K58 619 aaPredicted RBP20.05■□□□□ 0.8
SSB-206ENST00000461708 TCF25Q9BQ70 676 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
SSB-206ENST00000461708 SUCLA2Q9P2R7 463 aaPredicted RBP20.05■□□□□ 0.8
SSB-206ENST00000461708 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
SSB-206ENST00000461708 A0A087WZ62 844 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 SLC37A4O43826 429 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 PHKA2P46019 1235 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 SLC39A11Q8N1S5 342 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 FDXACB1Q9BRP7 624 aaPredicted RBP20.04■□□□□ 0.8
SSB-206ENST00000461708 PHF7Q9BWX1 381 aaPredicted RBP20.04■□□□□ 0.8
SSB-206ENST00000461708 CYP26B1Q9NR63 512 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 MUTYHQ9UIF7 546 aa20.04■□□□□ 0.8
SSB-206ENST00000461708 TMEM150BA6NC51 233 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 EML1O00423 815 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 ZNF623O75123 536 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 HOXB8P17481 243 aaPredicted RBP20.03■□□□□ 0.8
SSB-206ENST00000461708 FGFR4P22455 802 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 ANKRD1Q15327 319 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 WASF1Q92558 559 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 EDAQ92838 391 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 ENTPD7Q9NQZ7 604 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 ZDBF2Q9HCK1 2354 aa20.03■□□□□ 0.8
SSB-206ENST00000461708 CSDE1O75534 798 aaKnown RBP20.02■□□□□ 0.8
SSB-206ENST00000461708 P4HBP07237 508 aaKnown RBP20.02■□□□□ 0.8
SSB-206ENST00000461708 ALDH7A1P49419 539 aaKnown RBP20.02■□□□□ 0.8
SSB-206ENST00000461708 RAB27AP51159 221 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 PLPP4Q5VZY2 271 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 RHPN2Q8IUC4 686 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 MRPL43Q8N983 215 aaKnown RBP20.02■□□□□ 0.8
SSB-206ENST00000461708 HELQQ8TDG4 1101 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 SLC7A3Q8WY07 619 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 S1PR5Q9H228 398 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 TPCN1Q9ULQ1 816 aa20.02■□□□□ 0.8
SSB-206ENST00000461708 HIDE1A8MVS5 230 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
SSB-206ENST00000461708 RFC5P40937 340 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 SMC1AQ14683 1233 aaKnown RBP20.01■□□□□ 0.79
SSB-206ENST00000461708 EPHA7Q15375 998 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 TWF2Q6IBS0 349 aaKnown RBP20.01■□□□□ 0.79
SSB-206ENST00000461708 ANKRD54Q6NXT1 300 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 TMC7Q7Z402 723 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 BMP8AQ7Z5Y6 402 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 C4orf19Q8IY42 314 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 HAS1Q92839 578 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 MFSD14AQ96MC6 490 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 SH2D3AQ9BRG2 576 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 DHX33Q9H6R0 707 aaKnown RBP20.01■□□□□ 0.79
SSB-206ENST00000461708 IFT122Q9HBG6 1241 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 WDFY4Q6ZS81 3184 aa20.01■□□□□ 0.79
SSB-206ENST00000461708 CCNT1O60563 726 aaKnown RBP20■□□□□ 0.79
SSB-206ENST00000461708 PBX3P40426 434 aa20■□□□□ 0.79
SSB-206ENST00000461708 POLGP54098 1239 aaPredicted RBP20■□□□□ 0.79
SSB-206ENST00000461708 BCAR1P56945 870 aa20■□□□□ 0.79
SSB-206ENST00000461708 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
SSB-206ENST00000461708 BMS1Q14692 1282 aaKnown RBP20■□□□□ 0.79
SSB-206ENST00000461708 PLA2G4FQ68DD2 849 aa20■□□□□ 0.79
SSB-206ENST00000461708 GLB1LQ6UWU2 654 aa20■□□□□ 0.79
SSB-206ENST00000461708 CATSPER4Q7RTX7 472 aa20■□□□□ 0.79
SSB-206ENST00000461708 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
SSB-206ENST00000461708 SLFN12Q8IYM2 578 aa20■□□□□ 0.79
SSB-206ENST00000461708 AGPAT5Q9NUQ2 364 aa20■□□□□ 0.79
SSB-206ENST00000461708 FAM105AQ9NUU6 356 aa20■□□□□ 0.79
SSB-206ENST00000461708 PIN4Q9Y237 131 aaKnown RBP20■□□□□ 0.79
SSB-206ENST00000461708 COL4A3BPQ9Y5P4 624 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms