RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 TMEM270Q6UE05 265 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 THEM5Q8N1Q8 247 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 CCDC110Q8TBZ0 833 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 POLR3CQ9BUI4 534 aaPredicted RBP18.99■□□□□ 0.63
CHRD-208ENST00000460627 CALN1Q9BXU9 219 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 SUCLA2Q9P2R7 463 aaPredicted RBP18.99■□□□□ 0.63
CHRD-208ENST00000460627 TTC26A0AVF1 554 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 ASAP2O43150 1006 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 PRKCBP05771 671 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 EPHX2P34913 555 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 RAET1EQ8TD07 263 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 MRIQ9BWK5 157 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 STRIP2Q9ULQ0 834 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 DYNC1LI2O43237 492 aaPredicted RBP18.99■□□□□ 0.63
CHRD-208ENST00000460627 ELF1P32519 619 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 GTF2A2P52657 109 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 RWDD2BP57060 319 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 DRAP1Q14919 205 aaPredicted RBP18.99■□□□□ 0.63
CHRD-208ENST00000460627 ZNF394Q53GI3 561 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 CCHCR1Q8TD31 782 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 SEPT10Q9P0V9 454 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 CNOT8Q9UFF9 292 aaKnown RBP18.99■□□□□ 0.63
CHRD-208ENST00000460627 PPP1R9AQ9ULJ8 1098 aa18.99■□□□□ 0.63
CHRD-208ENST00000460627 TEX33O43247 280 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 ECEL1O95672 775 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 CALB1P05937 261 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 PLS3P13797 630 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 PRPSAP1Q14558 356 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 EMSYQ7Z589 1322 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 SGK1O00141 431 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 CRCPO75575 148 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 GSDMBQ8TAX9 411 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 PPM1EQ8WY54 764 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 HEXIM1O94992 359 aaKnown RBP18.98■□□□□ 0.63
CHRD-208ENST00000460627 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 GPC5P78333 572 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 ITKQ08881 620 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 TM4SF1P30408 202 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 INPP5BP32019 993 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 ARPP19P56211 112 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
CHRD-208ENST00000460627 SLIT3O75094 1523 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 I3L4J1 428 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 PFDN6O15212 129 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 SHMT1P34896 483 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 PRKCEQ02156 737 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 STK4Q13043 487 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 TRIM72Q6ZMU5 477 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 TAAR1Q96RJ0 339 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 DIS3Q9Y2L1 958 aaKnown RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 PPFIA4O75335 1185 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 SCP2P22307 547 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 NBPF12Q5TAG4 269 aaPredicted RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 ZNF746Q6NUN9 644 aaPredicted RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 RNF10Q8N5U6 811 aaKnown RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 MED1Q15648 1581 aaPredicted RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 UBE4BO95155 1302 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 OAS2P29728 719 aaKnown RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 SREBF2Q12772 1141 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 NTRK3Q16288 839 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 CDKL2Q92772 493 aa18.97■□□□□ 0.63
CHRD-208ENST00000460627 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.97■□□□□ 0.63
CHRD-208ENST00000460627 ANO9A1A5B4 782 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 UBE2Q2LH0YL09 131 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 SREBF1P36956 1147 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 GCLCP48506 637 aaPredicted RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 ARL13BQ3SXY8 428 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 KCTD6Q8NC69 237 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 CCDC188H7C350 402 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 CIITAP33076 1130 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 APOBEC3HQ6NTF7 200 aaKnown RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 TOGARAM2Q6ZUX3 1019 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 ZNF668Q96K58 619 aaPredicted RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 NGRNQ9NPE2 291 aaKnown RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 HBP1O60381 514 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 IQCB1Q15051 598 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 ZNF560Q96MR9 790 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 NUDT12Q9BQG2 462 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 GPBP1L1Q9HC44 474 aaPredicted RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 MED4Q9NPJ6 270 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.96■□□□□ 0.638e-7■■■■□ 24.2
CHRD-208ENST00000460627 SNRPFP62306 86 aaKnown RBP18.96■□□□□ 0.63
CHRD-208ENST00000460627 URGCPQ8TCY9 931 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 FBXO41Q8TF61 875 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 PDLIM2Q96JY6 352 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 DONSONQ9NYP3 566 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 ERAP1Q9NZ08 941 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 ANAPC7Q9UJX3 599 aa18.96■□□□□ 0.63
CHRD-208ENST00000460627 GOLGA8KD6RF30 607 aa18.95■□□□□ 0.62
CHRD-208ENST00000460627 MUTP22033 750 aa18.95■□□□□ 0.62
CHRD-208ENST00000460627 CXCR5P32302 372 aa18.95■□□□□ 0.62
CHRD-208ENST00000460627 EPHB4P54760 987 aa18.95■□□□□ 0.62
CHRD-208ENST00000460627 LAMC2Q13753 1193 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms