RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
C9orf3-209ENST00000460573 GOLGA6L4A6NEF3 574 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 GUCY2CP25092 1073 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 PBX2P40425 430 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 TFDP1Q14186 410 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 NAALADL2Q58DX5 795 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 RASIP1Q5U651 963 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 TSHZ1Q6ZSZ6 1077 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 SV2BQ7L1I2 683 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 PDILTQ8N807 584 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 NLRP7Q8WX94 980 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 APBB2Q92870 758 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 SCLT1Q96NL6 688 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 PANK2Q9BZ23 570 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 GCOM2Q9BZD3 368 aaPredicted RBP24.9■■□□□ 1.58
C9orf3-209ENST00000460573 POLR3FQ9H1D9 316 aaPredicted RBP24.9■■□□□ 1.58
C9orf3-209ENST00000460573 SLC28A3Q9HAS3 691 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 GINS2Q9Y248 185 aa24.9■■□□□ 1.58
C9orf3-209ENST00000460573 DLL1O00548 723 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 EIF4BP23588 611 aaKnown RBP24.89■■□□□ 1.58
C9orf3-209ENST00000460573 MCM6Q14566 821 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 LPIN1Q14693 890 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 PLEKHG4Q58EX7 1191 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 CNKSR3Q6P9H4 555 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 MAEAQ7L5Y9 396 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 LRRC15Q8TF66 581 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 SEPT8Q92599 483 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 DRC1Q96MC2 740 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 OSMRQ99650 979 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 RUSC1Q9BVN2 902 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 CDHR5Q9HBB8 845 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 KCNG1Q9UIX4 513 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 KCNH3Q9ULD8 1083 aa24.89■■□□□ 1.58
C9orf3-209ENST00000460573 GBF1Q92538 1859 aa24.89■■□□□ 1.57
C9orf3-209ENST00000460573 A0A087X0B3 334 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 GHRP10912 638 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 GRIN2CQ14957 1233 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 PPP2R5AQ15172 486 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 E2F4Q16254 413 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 GPBP1Q86WP2 473 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.88■■□□□ 1.57
C9orf3-209ENST00000460573 VWCEQ96DN2 955 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 PPP1R16BQ96T49 567 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 IFIH1Q9BYX4 1025 aaKnown RBP24.88■■□□□ 1.57
C9orf3-209ENST00000460573 LRRC27Q9C0I9 530 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 C17orf75Q9HAS0 396 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 MAGEF1Q9HAY2 307 aa24.88■■□□□ 1.57
C9orf3-209ENST00000460573 LAMA2P24043 3122 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 A0A087WZ62 844 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 FAM237AA0A1B0GTK4 181 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 GPR182O15218 404 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 POLR2DO15514 142 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 RPS6KA5O75582 802 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 DARSP14868 501 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 ATP2A2P16615 1042 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 GLRA2P23416 452 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 DHX8Q14562 1220 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 SRGAP1Q7Z6B7 1085 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 RNF149Q8NC42 400 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 MRPS27Q92552 414 aaKnown RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 IFT74Q96LB3 600 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 NLRP4Q96MN2 994 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 FDXACB1Q9BRP7 624 aaPredicted RBP24.87■■□□□ 1.57
C9orf3-209ENST00000460573 NFKBIZQ9BYH8 718 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 NKX2-4Q9H2Z4 354 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 GPRC5CQ9NQ84 441 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 USP25Q9UHP3 1055 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 ODF2LQ9ULJ1 636 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 HPSEQ9Y251 543 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 MYO9BQ13459 2157 aa24.87■■□□□ 1.57
C9orf3-209ENST00000460573 EFCAB14O75071 495 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 HIP1RO75146 1068 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 BAIAP3O94812 1187 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 SRGAP2CP0DJJ0 459 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 PFKFB1P16118 471 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 PHKA2P46019 1235 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 PAK2Q13177 524 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 ARSHQ5FYA8 562 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 IFNLR1Q8IU57 520 aaPredicted RBP24.86■■□□□ 1.57
C9orf3-209ENST00000460573 KSR1Q8IVT5 923 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 DBF4BQ8NFT6 615 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 ASAP3Q8TDY4 903 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 TMEM40Q8WWA1 233 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 IFT122Q9HBG6 1241 aa24.86■■□□□ 1.57
C9orf3-209ENST00000460573 COL6A3P12111 3177 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 A0A1B0GVL5 298 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 KRT18P05783 430 aaKnown RBP24.85■■□□□ 1.57
C9orf3-209ENST00000460573 KCNJ6P48051 423 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 AMPD3Q01432 767 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 IKBKEQ14164 716 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 PCBP1Q15365 356 aaKnown RBP eCLIP24.85■■□□□ 1.57
C9orf3-209ENST00000460573 CLEC17AQ6ZS10 378 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 DHX58Q96C10 678 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 FTHL17Q9BXU8 183 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 TNMDQ9H2S6 317 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 AGO3Q9H9G7 860 aaKnown RBP24.85■■□□□ 1.57
C9orf3-209ENST00000460573 PADI3Q9ULW8 664 aa24.85■■□□□ 1.57
C9orf3-209ENST00000460573 NOC2LQ9Y3T9 749 aaKnown RBP24.85■■□□□ 1.57
C9orf3-209ENST00000460573 SIP14410 1827 aa24.84■■□□□ 1.57
C9orf3-209ENST00000460573 ABHD14A-ACY1A0A1B0GW23 586 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms