RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CRYBB1P53674 252 aaPredicted RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 SOX10P56693 466 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 SNW1Q13573 536 aaKnown RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 MARCH8Q5T0T0 291 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 UBE2Q1Q7Z7E8 422 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 FAM178BQ8IXR5 827 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 DEPTORQ8TB45 409 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 DIS3LQ8TF46 1054 aaKnown RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 NLRP7Q8WX94 980 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 GSDMAQ96QA5 445 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 NFKBIZQ9BYH8 718 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 FAM49AQ9H0Q0 323 aaPredicted RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 NUP62CLQ9H1M0 184 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 EXOC1Q9NV70 894 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 PANK4Q9NVE7 773 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 ZBTB39O15060 712 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 HIP1RO75146 1068 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 PFKMP08237 780 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 RAG1P15918 1043 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 SELPP16109 830 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 ARL2P36404 184 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 MRPS6P82932 125 aaKnown RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 RBL2Q08999 1139 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 LAMTOR4Q0VGL1 99 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 STRN3Q13033 797 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 STIM1Q13586 685 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 GIT2Q14161 759 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 KLHL40Q2TBA0 621 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 HERC4Q5GLZ8 1057 aaPredicted RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 UNC13DQ70J99 1090 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 MAEAQ7L5Y9 396 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 LRRC71Q8N4P6 559 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 TRAPPC12Q8WVT3 735 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 PRPF31Q8WWY3 499 aaKnown RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 DPF3Q92784 378 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 TRPV6Q9H1D0 765 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 KMT5AQ9NQR1 393 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 OLFML3Q9NRN5 406 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
SMNDC1-203ENST00000460483 MCM3APO60318 1980 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 A0A087X0B3 334 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 LRRIQ4A6NIV6 560 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 GPR182O15218 404 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 TRAK2O60296 914 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 LIG1P18858 919 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 CLCN3P51790 818 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 ZNF131P52739 623 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 NLRP11P59045 1033 aaKnown RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 KCNB1Q14721 858 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 MAPK6Q16659 721 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 TRIML1Q8N9V2 468 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 RNF149Q8NC42 400 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM143Q96AN5 459 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 HVCN1Q96D96 273 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 NLRP4Q96MN2 994 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 SH2D3AQ9BRG2 576 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 RUSC1Q9BVN2 902 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 MRPL44Q9H9J2 332 aaKnown RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 PRDM5Q9NQX1 630 aaPredicted RBP12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 TRPV2Q9Y5S1 764 aa12.16□□□□□ -0.46
SMNDC1-203ENST00000460483 HTTP42858 3142 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 A0A087WWV3 80 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 MYMKA6NI61 221 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 K7ERI5 159 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 KIAA0355O15063 1070 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 ERLIN2O94905 339 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 TIMP1P01033 207 aa12.15□□□□□ -0.46
SMNDC1-203ENST00000460483 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms