RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MTMR9Q96QG7 549 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 HSD17B14Q9BPX1 270 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 C1QTNF1Q9BXJ1 281 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 GJB4Q9NTQ9 266 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 STK39Q9UEW8 545 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 COL4A3BPQ9Y5P4 624 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 DGAT1O75907 488 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 SLITRK3O94933 977 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 SEC24BO95487 1268 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 KCNA5P22460 613 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 PHKA2P46019 1235 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 RHPN2Q8IUC4 686 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 FAM178BQ8IXR5 827 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 EFHBQ8N7U6 833 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 COLGALT1Q8NBJ5 622 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 FBXO18Q8NFZ0 1043 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 CASD1Q96PB1 797 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 NFKBIZQ9BYH8 718 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 CWH43Q9H720 699 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 TTC12Q9H892 705 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 NGRNQ9NPE2 291 aaKnown RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 TYW1Q9NV66 732 aaKnown RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
HDLBP-228ENST00000459788 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
HDLBP-228ENST00000459788 ZMYM2Q9UBW7 1377 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 CNTNAP2Q9UHC6 1331 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 A0A087WZ62 844 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 JAK2O60674 1132 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 FGF18O76093 207 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 AXLP30530 894 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 KRT17Q04695 432 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 HYAL1Q12794 435 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 ADAM15Q13444 863 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 DRP2Q13474 957 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 EMC2Q15006 297 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 RABEP1Q15276 862 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 PAN2Q504Q3 1202 aaKnown RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 SPOUT1Q5T280 376 aaKnown RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 NCAPH2Q6IBW4 605 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 PTCRAQ6ISU1 281 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 CNNM3Q8NE01 707 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 PGBD4Q96DM1 585 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 C8orf76Q96K31 380 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 ZNF558Q96NG5 402 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 KIF2CQ99661 725 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 IFT122Q9HBG6 1241 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 TUFT1Q9NNX1 390 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 ALG13Q9NP73 1137 aaKnown RBP11.17□□□□□ -0.62
HDLBP-228ENST00000459788 TLR9Q9NR96 1032 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 AGPAT5Q9NUQ2 364 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 RNF19AQ9NV58 838 aa11.17□□□□□ -0.62
HDLBP-228ENST00000459788 FSCN2O14926 492 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 EYA4O95677 639 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 LTBRP36941 435 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 NPEPPSP55786 919 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 LAMTOR4Q0VGL1 99 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 COASYQ13057 564 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 SMAD4Q13485 552 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 TFDP1Q14186 410 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 BMS1Q14692 1282 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 SMAD2Q15796 467 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 TWF2Q6IBS0 349 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 TMEM184AQ6ZMB5 413 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 CATSPER4Q7RTX7 472 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 MRPL10Q7Z7H8 261 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 TPH2Q8IWU9 490 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 ERMNQ8TAM6 284 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 DYDC2Q96IM9 177 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 PPP1R16BQ96T49 567 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 MTRQ99707 1265 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 POLR3CQ9BUI4 534 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 UBN1Q9NPG3 1134 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 CLDND1Q9NY35 253 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 KANSL3Q9P2N6 904 aa11.16□□□□□ -0.62
HDLBP-228ENST00000459788 WRAP73Q9P2S5 460 aaPredicted RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
HDLBP-228ENST00000459788 MYH11P35749 1972 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms