RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ASCC3Q8N3C0 2202 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 MINDY4BA8MYZ0 360 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 GCOM1H8Y6P7 765 aaPredicted RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 SMIM24O75264 130 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 VIMP08670 466 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 MYZAPP0CAP1 466 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 PHKG2P15735 406 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 PPATQ06203 517 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC1A5Q15758 541 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 HP1BP3Q5SSJ5 553 aaPredicted RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 SNX30Q5VWJ9 437 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC15A3Q8IY34 581 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 GDAP1Q8TB36 358 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 PGM2Q96G03 612 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 HES6Q96HZ4 224 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 PSMD1Q99460 953 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 C20orf27Q9GZN8 174 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 STK32BQ9NY57 414 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 TBK1Q9UHD2 729 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 PHF24Q9UPV7 400 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 R3HDM2Q9Y2K5 976 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 EID1Q9Y6B2 187 aa4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.92□□□□□ -1.62
DEPDC1-202ENST00000456315 AFDNP55196 1824 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SRRM3A6NNA2 597 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PRPF3O43395 683 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PDE8BO95263 885 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 FGGP02679 453 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 NUDT17P0C025 328 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GOLGA8HP0CJ92 632 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 HIRAP54198 1017 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 COPS2P61201 443 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 KRT83P78385 493 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SSRP1Q08945 709 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CCDC178Q5BJE1 867 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 LDHAL6AQ6ZMR3 332 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 IFT20Q8IY31 132 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 MAGEB6Q8N7X4 407 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 LNX1Q8TBB1 728 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 FAM81AQ8TBF8 368 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 DENND1AQ8TEH3 1009 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ZFAND2BQ8WV99 257 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CTAGE1Q96RT6 745 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 WDR83Q9BRX9 315 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 RNF26Q9BY78 433 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 JAG2Q9Y219 1238 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 DSPP15924 2871 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 HNRNPRO43390 633 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC37A4O43826 429 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 IPO7O95373 1038 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 DEXIO95424 95 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 NPTXRO95502 500 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CYLC1P35663 651 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PAFAH1B1P43034 410 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SERPINB4P48594 390 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 FILIP1LQ4L180 1135 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ZNF449Q6P9G9 518 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 C14orf80Q86SX3 495 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TMPRSS6Q8IU80 811 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ATG4AQ8WYN0 398 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ARHGEF2Q92974 986 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CCDC47Q96A33 483 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TSC22D3Q99576 134 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 MYLK2Q9H1R3 596 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GPR108Q9NPR9 543 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 INTUQ9ULD6 942 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PPM1HQ9ULR3 514 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 PCDHA2Q9Y5H9 948 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 NID2Q14112 1375 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CITO14578 2027 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ZBTB39O15060 712 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 AKAP3O75969 853 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ACSL3O95573 720 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GSTT1P30711 240 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GMPRP36959 345 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CDR1P51861 262 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 RTP1P59025 263 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TUBB4BP68371 445 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 GRB10Q13322 594 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ARSHQ5FYA8 562 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 FAM219BQ5XKK7 198 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TMTC3Q6ZXV5 915 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ARL10Q8N8L6 244 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ZSWIM2Q8NEG5 633 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TPCN2Q8NHX9 752 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 STK32AQ8WU08 396 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TMEM87BQ96K49 555 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 ISCA1Q9BUE6 129 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 USP29Q9HBJ7 922 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 INTS9Q9NV88 658 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 TBC1D2BQ9UPU7 963 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 BZW2Q9Y6E2 419 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 CUBNO60494 3623 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 SPEF2Q9C093 1822 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 RBM47A0AV96 593 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 USP17L12C9JPN9 530 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 USP17L21D6R901 530 aa4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 DDX3YO15523 660 aaKnown RBP4.91□□□□□ -1.62
DEPDC1-202ENST00000456315 OATP04181 439 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms