RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 LRRC15Q8TF66 581 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SEC14L1Q92503 715 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 COA7Q96BR5 231 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SGSM3Q96HU1 749 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KRT12Q99456 494 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KDM4CQ9H3R0 1056 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KANSL2Q9H9L4 492 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MKNK2Q9HBH9 465 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLC40A1Q9NP59 571 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM114A2Q9NRY5 505 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM207AQ9NSI2 230 aaPredicted RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MAD2L2Q9UI95 211 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 INTUQ9ULD6 942 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CEP83Q9Y592 693 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NFS1Q9Y697 457 aa10.91□□□□□ -0.66
CHCHD4P3-201ENST00000455954 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 E7EVH7 732 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MYO1FO00160 1098 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 EPHB6O15197 1021 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NCK2O43639 380 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KRT14P02533 472 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM153BP0C7A2 387 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FCER1AP12319 257 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 VCAM1P19320 739 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ELF1P32519 619 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NPEPPSP55786 919 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GUCY1A3Q02108 690 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ICA1Q05084 483 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SLMAPQ14BN4 828 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RPS6KA1Q15418 735 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ASIC2Q16515 512 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM153CQ494X1 144 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TMEM119Q4V9L6 283 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ZCWPW2Q504Y3 356 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ANKRD20A8PQ5CZ79 823 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RNF187Q5TA31 235 aaPredicted RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 CACNA2D3Q8IZS8 1091 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 SH3TC2Q8TF17 1288 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LARP4BQ92615 738 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 LPAR1Q92633 364 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TATDN2Q93075 761 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 NAP1L4Q99733 375 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 MMTAG2Q9BU76 263 aaKnown RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 ATP6V0A4Q9HBG4 840 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 BLOC1S4Q9NUP1 217 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 RBPJLQ9UBG7 517 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 FAM153AQ9UHL3 310 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TTC7AQ9ULT0 858 aaPredicted RBP10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
CHCHD4P3-201ENST00000455954 KDM3AQ9Y4C1 1321 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MYMKA6NI61 221 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ADAMTS3O15072 1205 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAD51CO43502 376 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KIF4AO95239 1232 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 EEF2P13639 858 aaKnown RBP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 EZRP15311 586 aaKnown RBP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ERCC3P19447 782 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RASA1P20936 1047 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GRK4P32298 578 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CXCR5P32302 372 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GBP1P32455 592 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HSD17B3P37058 310 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FLT3LGP49771 235 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ZNF844Q08AG5 666 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KCNMA1Q12791 1236 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GRB10Q13322 594 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 IRF5Q13568 498 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KCTD16Q68DU8 428 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PPP1R18Q6NYC8 613 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HOOK3Q86VS8 718 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RASGEF1CQ8N431 466 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GPATCH11Q8N954 259 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCDC26Q8TAB7 109 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCHCR1Q8TD31 782 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PXYLP1Q8TE99 480 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 IFT81Q8WYA0 676 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAD54LQ92698 747 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CDK5RAP3Q96JB5 506 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms