RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 LRRC71Q8N4P6 559 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 MYCT1Q8N699 235 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 METTL13Q8N6R0 699 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 MLKLQ8NB16 471 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 KIAA0895Q8NCT3 520 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 BSNDQ8WZ55 320 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 VTI1AQ96AJ9 217 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 C11orf49Q9H6J7 331 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 SUGCTQ9HAC7 445 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 SIP14410 1827 aa12.43□□□□□ -0.42
TRAF4-206ENST00000454852 EVPLQ92817 2033 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 TRIP12Q14669 1992 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 SYCE3A1L190 88 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 CLCN3P51790 818 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 PEX3P56589 373 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 SOX10P56693 466 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 PTENP60484 403 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 ZNF200P98182 395 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 CAPSQ13938 189 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 TFDP1Q14186 410 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 PCBP1Q15365 356 aaKnown RBP eCLIP12.42□□□□□ -0.426e-7■■■□□ 15.8
TRAF4-206ENST00000454852 TRIM71Q2Q1W2 868 aaKnown RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 FAM47CQ5HY64 1035 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 FAM26DQ5JW98 314 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 FAM43BQ6ZT52 329 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 TMEM161BQ8NDZ6 487 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 DIS3LQ8TF46 1054 aaKnown RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 SENP6Q9GZR1 1112 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 C2orf40Q9H1Z8 148 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 ADAMTS10Q9H324 1103 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 TMEM134Q9H6X4 195 aa12.42□□□□□ -0.42
TRAF4-206ENST00000454852 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
TRAF4-206ENST00000454852 B4GALT4O60513 344 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 GPR32O75388 356 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 KIF20AO95235 890 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 CAVIN2O95810 425 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 GPC3P51654 580 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 EFNA5P52803 228 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 CHMP4BP1P59074 171 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 STX1AQ16623 288 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 STXBP4Q6ZWJ1 553 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 HAUS6Q7Z4H7 955 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 RSPH3Q86UC2 560 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 ADSSL1Q8N142 457 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 TMEM174Q8WUU8 243 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 SCFD1Q8WVM8 642 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 ZBTB10Q96DT7 871 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
TRAF4-206ENST00000454852 CCDC113Q9H0I3 377 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 MRPL44Q9H9J2 332 aaKnown RBP12.41□□□□□ -0.42
TRAF4-206ENST00000454852 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 KMT5AQ9NQR1 393 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
TRAF4-206ENST00000454852 ANO10Q9NW15 660 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
TRAF4-206ENST00000454852 ADGRA3Q8IWK6 1321 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 PPP1R3GB7ZBB8 358 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 TLR3O15455 904 aaKnown RBP12.4□□□□□ -0.42
TRAF4-206ENST00000454852 CASP5P51878 434 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 MRPS6P82932 125 aaKnown RBP12.4□□□□□ -0.42
TRAF4-206ENST00000454852 TYRO3Q06418 890 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 MGAT3Q09327 533 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 FAM187BQ17R55 369 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 COL13A1Q5TAT6 717 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-206ENST00000454852 LRSAM1Q6UWE0 723 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 MAP4K3Q8IVH8 894 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 PPP1R13LQ8WUF5 828 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 DNAJB3Q8WWF6 145 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
TRAF4-206ENST00000454852 WNT8BQ93098 351 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 DHTKD1Q96HY7 919 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-206ENST00000454852 FGFBP2Q9BYJ0 223 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 FZD8Q9H461 694 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 ZHX3Q9H4I2 956 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 POLD4Q9HCU8 107 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 SLC39A2Q9NP94 309 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 AKT3Q9Y243 479 aa12.4□□□□□ -0.42
TRAF4-206ENST00000454852 CCDC169A6NNP5 214 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 K7ENM7 598 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 BIN1O00499 593 aa12.39□□□□□ -0.43
TRAF4-206ENST00000454852 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms