RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 CEP57L1Q8IYX8 460 aa16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 MRPS27Q92552 414 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.189e-8■■■■■ 41.1
NCKIPSD-207ENST00000453349 IFIH1Q9BYX4 1025 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 POLD4Q9HCU8 107 aa16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 NOC2LQ9Y3T9 749 aaKnown RBP16.18■□□□□ 0.18
NCKIPSD-207ENST00000453349 TCHHQ07283 1943 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 TANC1Q9C0D5 1861 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 DARSP14868 501 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 CD52P31358 61 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 SYKP43405 635 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 PHKA2P46019 1235 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 ARSHQ5FYA8 562 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 OTOP2Q7RTS6 562 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 FSIP1Q8NA03 581 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 ASAP3Q8TDY4 903 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 LRRC15Q8TF66 581 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 OSBPL7Q9BZF2 842 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 C17orf75Q9HAS0 396 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 IFT122Q9HBG6 1241 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 ODF2LQ9ULJ1 636 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 PADI3Q9ULW8 664 aa16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 MKI67P46013 3256 aaKnown RBP16.17■□□□□ 0.18
NCKIPSD-207ENST00000453349 NPHP3-ACAD11A0A0J9YXS1 232 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 ABHD14A-ACY1A0A1B0GW23 586 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 LRRIQ4A6NIV6 560 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 SFI1A8K8P3 1242 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 EFCAB14O75071 495 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 BAIAP3O94812 1187 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 NAMPTP43490 491 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 CAPSQ13938 189 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 GIT2Q14161 759 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 SHHQ15465 462 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 E2F4Q16254 413 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 DYMQ7RTS9 669 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 DEPTORQ8TB45 409 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 TMEM40Q8WWA1 233 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 HERVK_113Q902F9 699 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 DDX12PQ92771 950 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 VWCEQ96DN2 955 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 FTHL17Q9BXU8 183 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 C2orf40Q9H1Z8 148 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 LARSQ9P2J5 1176 aaKnown RBP16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 ST3GAL5Q9UNP4 418 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
NCKIPSD-207ENST00000453349 FAM237AA0A1B0GTK4 181 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 CCDC169A6NNP5 214 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 FAM13AO94988 1023 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 PLS3P13797 630 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 ZSCAN20P17040 1043 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 NDUFA8P51970 172 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 SMTNP53814 917 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 PEX3P56589 373 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 PTENP60484 403 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 NCBP1Q09161 790 aaKnown RBP16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 DMP1Q13316 513 aaPredicted RBP16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 REEP2Q9BRK0 252 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 NFKBIZQ9BYH8 718 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 ZHX3Q9H4I2 956 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 ERVK-5Q9HDB9 667 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 KBTBD4Q9NVX7 518 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
NCKIPSD-207ENST00000453349 TNRC18O15417 2968 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 MYMKA6NI61 221 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 SLFN14P0C7P3 912 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 FGFR4P22455 802 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 KCNJ6P48051 423 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 MAPK7Q13164 816 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 PCBP1Q15365 356 aaKnown RBP eCLIP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 LONRF3Q496Y0 759 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 C9orf50Q5SZB4 431 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 CLEC17AQ6ZS10 378 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 CATSPER4Q7RTX7 472 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 DAW1Q8N136 415 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 MYCT1Q8N699 235 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 BSNDQ8WZ55 320 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 STAMQ92783 540 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 CCDC34Q96HJ3 373 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 KMT5AQ9NQR1 393 aa16.14■□□□□ 0.17
NCKIPSD-207ENST00000453349 COLQQ9Y215 455 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms