RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 LMCD1Q9NZU5 365 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 MTMR6Q9Y217 621 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 ADGRA3Q8IWK6 1321 aa17.95■□□□□ 0.46
SCAMP4-205ENST00000452128 STAG3L1P0CL83 205 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 CYP11B2P19099 503 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 PDCP20941 246 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 GLRA2P23416 452 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 CDC25AP30304 524 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 BMPR1AP36894 532 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 GATMP50440 423 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 FAM102BQ5T8I3 360 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 DTHD1Q6ZMT9 781 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 SRGAP1Q7Z6B7 1085 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 ECHDC2Q86YB7 292 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 CMTR2Q8IYT2 770 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 ERMNQ8TAM6 284 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 MTRQ99707 1265 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 NFKBIZQ9BYH8 718 aa17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 BMP2KQ9NSY1 1161 aaPredicted RBP17.94■□□□□ 0.46
SCAMP4-205ENST00000452128 DENND3A2RUS2 1198 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 H3BNC9 293 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 ZNF623O75123 536 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 SRGAP2CP0DJJ0 459 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 PTPAQ15257 358 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 AMHR2Q16671 573 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 FIBCD1Q8N539 461 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 NLRP4Q96MN2 994 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 INO80BQ9C086 356 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 ATP6V0A4Q9HBG4 840 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 PCDHB7Q9Y5E2 793 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 STK24Q9Y6E0 443 aa17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 MRPL42Q9Y6G3 142 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-205ENST00000452128 RB1P06400 928 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 CCT6AP40227 531 aaKnown RBP17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 CAPSQ13938 189 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 UBXN11Q5T124 520 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 HAUS3Q68CZ6 603 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 RNF149Q8NC42 400 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 CASD1Q96PB1 797 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 PNMA5Q96PV4 448 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 AGPAT5Q9NUQ2 364 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 MTUS1Q9ULD2 1270 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 KIAA1024Q9UPX6 916 aa17.92■□□□□ 0.46
SCAMP4-205ENST00000452128 EOMESO95936 686 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 FGFR1P11362 822 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 IGFBP4P22692 258 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 CAMK1Q14012 370 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 BTG3Q14201 252 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 PADI6Q6TGC4 694 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 LRRC55Q6ZSA7 311 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 BSNDQ8WZ55 320 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 CWH43Q9H720 699 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 MORC2Q9Y6X9 1032 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 VCANP13611 3396 aa17.91■□□□□ 0.46
SCAMP4-205ENST00000452128 XIRP2A4UGR9 3374 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 MYO7AQ13402 2215 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 USO1O60763 962 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 EYA4O95677 639 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 ZSCAN20P17040 1043 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 SFPQP23246 707 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 PHKA2P46019 1235 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 GRIN1Q05586 938 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 SF3A1Q15459 793 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 CLLU1OSQ5K130 101 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 CDCA2Q69YH5 1023 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 FAM173BQ6P4H8 233 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 MRPL10Q7Z7H8 261 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 MCPH1Q8NEM0 835 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 LRRC15Q8TF66 581 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 SCLT1Q96NL6 688 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 POLR3FQ9H1D9 316 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 PRDM6Q9NQX0 595 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 DDX19AQ9NUU7 478 aaKnown RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 CLIC4Q9Y696 253 aa17.9■□□□□ 0.46
SCAMP4-205ENST00000452128 ARID2Q68CP9 1835 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 PCBP1Q15365 356 aaKnown RBP eCLIP17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 TMEM119Q4V9L6 283 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 KRT79Q5XKE5 535 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 C1orf186Q6ZWK4 172 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 CATSPER4Q7RTX7 472 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 DAW1Q8N136 415 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 KCTD17Q8N5Z5 321 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 PLVAPQ9BX97 442 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 TMEM117Q9H0C3 514 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 BHMT2Q9H2M3 363 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 DACT1Q9NYF0 836 aa17.89■□□□□ 0.45
SCAMP4-205ENST00000452128 HCSTQ9UBK5 93 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms