RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 KIF2CQ99661 725 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 PUF60Q9UHX1 559 aaKnown RBP17.91■□□□□ 0.46
SGCE-208ENST00000450385 COL4A3BPQ9Y5P4 624 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 A0A087WZ62 844 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 ST18O60284 1047 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 ITGB1P05556 798 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 MUTP22033 750 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 PPM1AP35813 382 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 KCNQ1P51787 676 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 PLCB3Q01970 1234 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 PAN2Q504Q3 1202 aaKnown RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 SPOUT1Q5T280 376 aaKnown RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 FAM102BQ5T8I3 360 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 CCDC83Q8IWF9 413 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 PPP1R16BQ96T49 567 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 EIF2AK1Q9BQI3 630 aaKnown RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 FDXACB1Q9BRP7 624 aaPredicted RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 MRPL9Q9BYD2 267 aaKnown RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 TYW1Q9NV66 732 aaKnown RBP17.9■□□□□ 0.46
SGCE-208ENST00000450385 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
SGCE-208ENST00000450385 DGAT1O75907 488 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 MCM2P49736 904 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 NPEPPSP55786 919 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 DRP2Q13474 957 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 ZNF598Q86UK7 904 aaKnown RBP17.89■□□□□ 0.45
SGCE-208ENST00000450385 TPH2Q8IWU9 490 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 LRRC43Q8N309 656 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 PRPF31Q8WWY3 499 aaKnown RBP17.89■□□□□ 0.45
SGCE-208ENST00000450385 DYDC2Q96IM9 177 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 CASD1Q96PB1 797 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 CDCA3Q99618 268 aaPredicted RBP17.89■□□□□ 0.45
SGCE-208ENST00000450385 IFT122Q9HBG6 1241 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 RGL1Q9NZL6 768 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 STK39Q9UEW8 545 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 PRKAG3Q9UGI9 489 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 ATG2AQ2TAZ0 1938 aa17.89■□□□□ 0.45
SGCE-208ENST00000450385 ARID2Q68CP9 1835 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 GRXCR2A6NFK2 248 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 KCNA5P22460 613 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 AXLP30530 894 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 TXKP42681 527 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 PHKA2P46019 1235 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 KRT17Q04695 432 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 NCBP1Q09161 790 aaKnown RBP17.88■□□□□ 0.45
SGCE-208ENST00000450385 LAMTOR4Q0VGL1 99 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 ST3GAL1Q11201 340 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 CAMK1Q14012 370 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 BMS1Q14692 1282 aaKnown RBP17.88■□□□□ 0.45
SGCE-208ENST00000450385 XKR9Q5GH70 373 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 PLA2G4FQ68DD2 849 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 CATSPER4Q7RTX7 472 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 CNNM3Q8NE01 707 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 POF1BQ8WVV4 589 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 MTRQ99707 1265 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 NFKBIZQ9BYH8 718 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 CWH43Q9H720 699 aa17.88■□□□□ 0.45
SGCE-208ENST00000450385 ALG13Q9NP73 1137 aaKnown RBP17.88■□□□□ 0.45
SGCE-208ENST00000450385 WRAP73Q9P2S5 460 aaPredicted RBP17.88■□□□□ 0.45
SGCE-208ENST00000450385 TMEM150BA6NC51 233 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 FAM205CA6NFA0 338 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 FGF18O76093 207 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 U2AF2P26368 475 aaKnown RBP eCLIP17.87■□□□□ 0.454e-7■■□□□ 11.5
SGCE-208ENST00000450385 GNL2Q13823 731 aaKnown RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 TFDP1Q14186 410 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 EMC2Q15006 297 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 TWF2Q6IBS0 349 aaKnown RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 FERMT3Q86UX7 667 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 IFNLR1Q8IU57 520 aaPredicted RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 NOSTRINQ8IVI9 506 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 ERMNQ8TAM6 284 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 CCDC51Q96ER9 411 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 NLRP4Q96MN2 994 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 POLR3CQ9BUI4 534 aaPredicted RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 NGRNQ9NPE2 291 aaKnown RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 UBN1Q9NPG3 1134 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 AGPAT5Q9NUQ2 364 aa17.87■□□□□ 0.45
SGCE-208ENST00000450385 NOL7Q9UMY1 257 aaKnown RBP17.87■□□□□ 0.45
SGCE-208ENST00000450385 PLXNA4Q9HCM2 1894 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 FGFR1P11362 822 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 HYAL1Q12794 435 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 ADAM15Q13444 863 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 CTTNQ14247 550 aaKnown RBP17.86■□□□□ 0.45
SGCE-208ENST00000450385 PDIA5Q14554 519 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 PTCRAQ6ISU1 281 aaPredicted RBP17.86■□□□□ 0.45
SGCE-208ENST00000450385 THNSL1Q8IYQ7 743 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 EFHBQ8N7U6 833 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 CCDC43Q96MW1 224 aaKnown RBP17.86■□□□□ 0.45
SGCE-208ENST00000450385 ZNF558Q96NG5 402 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 NACC1Q96RE7 527 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 TLR9Q9NR96 1032 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 RNF19AQ9NV58 838 aa17.86■□□□□ 0.45
SGCE-208ENST00000450385 CLDND1Q9NY35 253 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms