RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ECHDC2Q86YB7 292 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 IGSF22Q8N9C0 903 aa15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 DBR1Q9UK59 544 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 NOL7Q9UMY1 257 aaKnown RBP15.7■□□□□ 0.1
RTFDC1-204ENST00000449062 XIRP2A4UGR9 3374 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 DGAT1O75907 488 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 ZSCAN20P17040 1043 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 ATF7P17544 494 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 POU5F1BQ06416 359 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 GNL2Q13823 731 aaKnown RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 SRGAP1Q7Z6B7 1085 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 CASD1Q96PB1 797 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 NACC1Q96RE7 527 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 PLVAPQ9BX97 442 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 INO80BQ9C086 356 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 LRFN2Q9ULH4 789 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
RTFDC1-204ENST00000449062 GRM6O15303 877 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 ZNF623O75123 536 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 EOMESO95936 686 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 SRGAP2CP0DJJ0 459 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 FGFR1P11362 822 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 MUTP22033 750 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 PRPHP41219 470 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 PTENP60484 403 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 LRRC55Q6ZSA7 311 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 IFNLR1Q8IU57 520 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 ASAP3Q8TDY4 903 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 ATXN2LQ8WWM7 1075 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 P2RX5Q93086 422 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 NLRP4Q96MN2 994 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 PLAGL2Q9UPG8 496 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 RWDD3Q9Y3V2 267 aa15.68■□□□□ 0.1
RTFDC1-204ENST00000449062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 LAD1O00515 517 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 GLRA2P23416 452 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 CTNNB1P35222 781 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 MXD4Q14582 209 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 COL19A1Q14993 1142 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 PAN2Q504Q3 1202 aaKnown RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 NAALADL2Q58DX5 795 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 MCTP1Q6DN14 999 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 SPPL3Q8TCT6 385 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 SCLT1Q96NL6 688 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 MTRQ99707 1265 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 MMTAG2Q9BU76 263 aaKnown RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 C11orf84Q9BUA3 381 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 COL25A1Q9BXS0 654 aaPredicted RBP15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 CWH43Q9H720 699 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
RTFDC1-204ENST00000449062 TBKBP1A7MCY6 615 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 ITGB1P05556 798 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 DNAJB1P25685 340 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 PHKA2P46019 1235 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 AMHR2Q16671 573 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 CLLU1OSQ5K130 101 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 POTEGQ6S5H5 508 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 MRPL10Q7Z7H8 261 aaKnown RBP15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 ASB2Q96Q27 587 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 DACT1Q9NYF0 836 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 THEGQ9P2T0 379 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 HCSTQ9UBK5 93 aa15.66■□□□□ 0.1
RTFDC1-204ENST00000449062 H3BQV1 296 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 DLL1O00548 723 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 BMP1P13497 986 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 CYP11B2P19099 503 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 MRPS5P82675 430 aaKnown RBP15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 TFF2Q03403 129 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 CAPSQ13938 189 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 PTPROQ16827 1216 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 CATSPER4Q7RTX7 472 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 KLHL23Q8NBE8 558 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 INTS4Q96HW7 963 aaKnown RBP15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 NFKBIZQ9BYH8 718 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 LMAN2LQ9H0V9 348 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 GPRC5CQ9NQ84 441 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 COG5Q9UP83 839 aa15.65■□□□□ 0.1
RTFDC1-204ENST00000449062 MEIS3P2A8K0S8 358 aa15.64■□□□□ 0.09
RTFDC1-204ENST00000449062 PP2D1A8MPX8 630 aa15.64■□□□□ 0.09
RTFDC1-204ENST00000449062 IBSPP21815 317 aaPredicted RBP15.64■□□□□ 0.09
RTFDC1-204ENST00000449062 CDC25AP30304 524 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms