RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CPLX1O14810 134 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 DEXIO95424 95 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 BMP8AQ7Z5Y6 402 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 SLC39A11Q8N1S5 342 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 MRPL43Q8N983 215 aaKnown RBP17.47■□□□□ 0.39
TRA2A-203ENST00000448549 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
TRA2A-203ENST00000448549 PLXNA4Q9HCM2 1894 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 A0A087WZ62 844 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 IGKV6-21A0A0C4DH24 114 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 NT5C1B-RDH14C9J2C7 533 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 M0R2N6 131 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 ALDH7A1P49419 539 aaKnown RBP17.46■□□□□ 0.39
TRA2A-203ENST00000448549 MRE11P49959 708 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 DNM2P50570 870 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 CDC42EP1Q00587 391 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 STK3Q13188 491 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 NPY5RQ15761 445 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 ETNPPLQ8TBG4 499 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 ZNF274Q96GC6 653 aaPredicted RBP17.46■□□□□ 0.39
TRA2A-203ENST00000448549 MBOAT7Q96N66 472 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 FDXACB1Q9BRP7 624 aaPredicted RBP17.46■□□□□ 0.39
TRA2A-203ENST00000448549 MRPL9Q9BYD2 267 aaKnown RBP17.46■□□□□ 0.39
TRA2A-203ENST00000448549 CHST12Q9NRB3 414 aa17.46■□□□□ 0.39
TRA2A-203ENST00000448549 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
TRA2A-203ENST00000448549 C2orf71A6NGG8 1288 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 MAFO75444 373 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 HOXB8P17481 243 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 SP100P23497 879 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 PHKA2P46019 1235 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 BCAR1P56945 870 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 SMC1AQ14683 1233 aaKnown RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 INF2Q27J81 1249 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 ANO5Q75V66 913 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 RHPN2Q8IUC4 686 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 KSR1Q8IVT5 923 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 LPPQ93052 612 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 CDH22Q9UJ99 828 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 HCFC2Q9Y5Z7 792 aa17.45■□□□□ 0.38
TRA2A-203ENST00000448549 FNDC1Q4ZHG4 1894 aaPredicted RBP17.45■□□□□ 0.38
TRA2A-203ENST00000448549 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRA2A-203ENST00000448549 CA8P35219 290 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 NONOQ15233 471 aaKnown RBP eCLIP17.44■□□□□ 0.383e-11■□□□□ 10.5
TRA2A-203ENST00000448549 IER5LQ5T953 404 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 GALNT17Q6IS24 598 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 MOXD1Q6UVY6 613 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 CASP10Q92851 521 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 TRAIPQ9BWF2 469 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
TRA2A-203ENST00000448549 PIN4Q9Y237 131 aaKnown RBP17.44■□□□□ 0.38
TRA2A-203ENST00000448549 EML1O00423 815 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 SLC37A4O43826 429 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 CLASP2O75122 1294 aaKnown RBP17.43■□□□□ 0.38
TRA2A-203ENST00000448549 ZC3H11AO75152 810 aaKnown RBP eCLIP17.43■□□□□ 0.388e-9■□□□□ 8.4
TRA2A-203ENST00000448549 CXCL14O95715 111 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 PSMC5P62195 406 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 SIGLEC14Q08ET2 396 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 PTPN21Q16825 1174 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 PLA2G4FQ68DD2 849 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 CPLX2Q6PUV4 134 aaKnown RBP17.43■□□□□ 0.38
TRA2A-203ENST00000448549 KRT25Q7Z3Z0 450 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 TMEM173Q86WV6 379 aaPredicted RBP17.43■□□□□ 0.38
TRA2A-203ENST00000448549 SUGP1Q8IWZ8 645 aaKnown RBP17.43■□□□□ 0.38
TRA2A-203ENST00000448549 TMEM169Q96HH4 297 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 TM6SF1Q9BZW5 370 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 INO80BQ9C086 356 aaPredicted RBP17.43■□□□□ 0.38
TRA2A-203ENST00000448549 EVPLQ92817 2033 aa17.43■□□□□ 0.38
TRA2A-203ENST00000448549 MEIS3P2A8K0S8 358 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
TRA2A-203ENST00000448549 NPEPPSP55786 919 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 GLB1LQ6UWU2 654 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 CATSPER4Q7RTX7 472 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
TRA2A-203ENST00000448549 VPS52Q8N1B4 723 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 FBXL6Q8N531 539 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
TRA2A-203ENST00000448549 PRSS33Q8NF86 280 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 AUTS2Q8WXX7 1259 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 ASIC4Q96FT7 647 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
TRA2A-203ENST00000448549 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 FAM105AQ9NUU6 356 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 TBC1D13Q9NVG8 400 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 VAV3Q9UKW4 847 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
TRA2A-203ENST00000448549 PIEZO1Q92508 2521 aa17.41■□□□□ 0.38
TRA2A-203ENST00000448549 TECTAO75443 2155 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms