RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CCDC194A0A1B0GVG4 234 aa31.76■■■□□ 2.67
CBX4-202ENST00000448310 PDE12Q6L8Q7 609 aaKnown RBP31.76■■■□□ 2.67
CBX4-202ENST00000448310 CDCA3Q99618 268 aaPredicted RBP31.76■■■□□ 2.67
CBX4-202ENST00000448310 SLKQ9H2G2 1235 aaPredicted RBP31.76■■■□□ 2.67
CBX4-202ENST00000448310 DACT1Q9NYF0 836 aa31.76■■■□□ 2.67
CBX4-202ENST00000448310 SUCLA2Q9P2R7 463 aaPredicted RBP31.76■■■□□ 2.67
CBX4-202ENST00000448310 PUF60Q9UHX1 559 aaKnown RBP31.76■■■□□ 2.67
CBX4-202ENST00000448310 CDKL5O76039 1030 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 DNM2P50570 870 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 PSMC5P62195 406 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 RHPN2Q8IUC4 686 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 KSR1Q8IVT5 923 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 OXER1Q8TDS5 423 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 VAV3Q9UKW4 847 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 TPCN1Q9ULQ1 816 aa31.75■■■□□ 2.67
CBX4-202ENST00000448310 HIDE1A8MVS5 230 aa31.74■■■□□ 2.67
CBX4-202ENST00000448310 MAFO75444 373 aaPredicted RBP31.74■■■□□ 2.67
CBX4-202ENST00000448310 HERC4Q5GLZ8 1057 aaPredicted RBP31.74■■■□□ 2.67
CBX4-202ENST00000448310 KCNMB3Q9NPA1 279 aa31.74■■■□□ 2.67
CBX4-202ENST00000448310 SPG21Q9NZD8 308 aa31.74■■■□□ 2.67
CBX4-202ENST00000448310 TECTAO75443 2155 aa31.74■■■□□ 2.67
CBX4-202ENST00000448310 EOMESO95936 686 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 PPM1AP35813 382 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 LONRF3Q496Y0 759 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 LLGL2Q6P1M3 1020 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 NEK8Q86SG6 692 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 NLRP4Q96MN2 994 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 STK36Q9NRP7 1315 aa31.73■■■□□ 2.67
CBX4-202ENST00000448310 PFKFB2O60825 505 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 SFPQP23246 707 aaKnown RBP eCLIP31.72■■■□□ 2.67
CBX4-202ENST00000448310 NPEPPSP55786 919 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 CDC42EP1Q00587 391 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 KRT17Q04695 432 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 PPP2R5CQ13362 524 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 PIK3AP1Q6ZUJ8 805 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 SLC39A11Q8N1S5 342 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 ZNF579Q8NAF0 562 aaKnown RBP31.72■■■□□ 2.67
CBX4-202ENST00000448310 LPPQ93052 612 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 CHST12Q9NRB3 414 aa31.72■■■□□ 2.67
CBX4-202ENST00000448310 WRAP73Q9P2S5 460 aaPredicted RBP31.72■■■□□ 2.67
CBX4-202ENST00000448310 PIN4Q9Y237 131 aaKnown RBP31.72■■■□□ 2.67
CBX4-202ENST00000448310 LOC730098B7Z3J9 87 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 NT5C1B-RDH14C9J2C7 533 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 CCNT1O60563 726 aaKnown RBP31.71■■■□□ 2.67
CBX4-202ENST00000448310 TECP42680 631 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 PHKA2P46019 1235 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 QARSP47897 775 aaKnown RBP31.71■■■□□ 2.67
CBX4-202ENST00000448310 KCNC3Q14003 757 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 TWF2Q6IBS0 349 aaKnown RBP31.71■■■□□ 2.67
CBX4-202ENST00000448310 TMC7Q7Z402 723 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 ZNF410Q86VK4 478 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 APOL5Q9BWW9 433 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 NGRNQ9NPE2 291 aaKnown RBP31.71■■■□□ 2.67
CBX4-202ENST00000448310 CYP26B1Q9NR63 512 aa31.71■■■□□ 2.67
CBX4-202ENST00000448310 FSD2A1L4K1 749 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 CTDNEP1O95476 244 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 XBP1P17861 261 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 EARS2Q5JPH6 523 aaKnown RBP31.7■■■□□ 2.67
CBX4-202ENST00000448310 PPP4R3AQ6IN85 833 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 HFE2Q6ZVN8 426 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 HAS1Q92839 578 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 RPGRIP1Q96KN7 1286 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 FAM20AQ96MK3 541 aa31.7■■■□□ 2.67
CBX4-202ENST00000448310 PHF7Q9BWX1 381 aaPredicted RBP31.7■■■□□ 2.67
CBX4-202ENST00000448310 ARID2Q68CP9 1835 aa31.7■■■□□ 2.66
CBX4-202ENST00000448310 ZNF318Q5VUA4 2279 aa31.69■■■□□ 2.66
CBX4-202ENST00000448310 BCAR1P56945 870 aa31.69■■■□□ 2.66
CBX4-202ENST00000448310 ANKRD54Q6NXT1 300 aa31.69■■■□□ 2.66
CBX4-202ENST00000448310 CATSPER4Q7RTX7 472 aa31.69■■■□□ 2.66
CBX4-202ENST00000448310 SUSD6Q92537 303 aa31.69■■■□□ 2.66
CBX4-202ENST00000448310 MRPL9Q9BYD2 267 aaKnown RBP31.69■■■□□ 2.66
CBX4-202ENST00000448310 INO80BQ9C086 356 aaPredicted RBP31.69■■■□□ 2.66
CBX4-202ENST00000448310 BMP2KQ9NSY1 1161 aaPredicted RBP31.69■■■□□ 2.66
CBX4-202ENST00000448310 FAM205CA6NFA0 338 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 MEIS3P2A8K0S8 358 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 SRGAP2BP0DMP2 458 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 GCFC2P16383 781 aaKnown RBP31.68■■■□□ 2.66
CBX4-202ENST00000448310 HOXD11P31277 338 aaPredicted RBP31.68■■■□□ 2.66
CBX4-202ENST00000448310 TMEM184AQ6ZMB5 413 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 POTEDQ86YR6 584 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 CEP170P1Q96L14 293 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 JPH2Q9BR39 696 aaPredicted RBP31.68■■■□□ 2.66
CBX4-202ENST00000448310 S1PR5Q9H228 398 aa31.68■■■□□ 2.66
CBX4-202ENST00000448310 ORC3Q9UBD5 711 aaPredicted RBP31.68■■■□□ 2.66
CBX4-202ENST00000448310 AK2P54819 239 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 CBX2Q14781 532 aaPredicted RBP31.67■■■□□ 2.66
CBX4-202ENST00000448310 SYCE2Q6PIF2 218 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 EDAQ92838 391 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 TRAIPQ9BWF2 469 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 IFT122Q9HBG6 1241 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 FAM105AQ9NUU6 356 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 COL4A3BPQ9Y5P4 624 aa31.67■■■□□ 2.66
CBX4-202ENST00000448310 MARCH6O60337 910 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 ZC3H11AO75152 810 aaKnown RBP eCLIP31.66■■■□□ 2.66
CBX4-202ENST00000448310 NEFLP07196 543 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 P4HBP07237 508 aaKnown RBP31.66■■■□□ 2.66
CBX4-202ENST00000448310 CA8P35219 290 aa31.66■■■□□ 2.66
CBX4-202ENST00000448310 ALDH7A1P49419 539 aaKnown RBP31.66■■■□□ 2.66
CBX4-202ENST00000448310 SMC1AQ14683 1233 aaKnown RBP31.66■■■□□ 2.66
CBX4-202ENST00000448310 NCAPH2Q6IBW4 605 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms