RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 UBR3Q6ZT12 1888 aa20.67■□□□□ 0.9
SDCBP-204ENST00000447182 IGLV3-22A0A075B6J6 115 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 OPLAHO14841 1288 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TRIM37O94972 964 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ABCB4P21439 1286 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ZNF131P52739 623 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 KLRC3Q07444 240 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 KIF22Q14807 665 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TCEAL1Q15170 157 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 CBWD6Q4V339 395 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ANKRD20A8PQ5CZ79 823 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 CBWD3Q5JTY5 395 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 CBWD5Q5RIA9 395 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 GKAP1Q5VSY0 366 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TAX1BP1Q86VP1 789 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 RHOT2Q8IXI1 618 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 CYP2W1Q8TAV3 490 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ARHGEF26Q96DR7 871 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 PGM2Q96G03 612 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 INTS2Q9H0H0 1204 aaKnown RBP20.66■□□□□ 0.9
SDCBP-204ENST00000447182 THSD7AQ9UPZ6 1657 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 F5H6K3 240 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 PIK3CDO00329 1044 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 VCAM1P19320 739 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TNFAIP3P21580 790 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 DRD4P21917 467 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ZC2HC1CQ53FD0 456 aaPredicted RBP20.66■□□□□ 0.9
SDCBP-204ENST00000447182 SYDE2Q5VT97 1194 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 HS2ST1Q7LGA3 356 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ZNF720Q7Z2F6 126 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TEX2Q8IWB9 1127 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 TRIM31Q9BZY9 425 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ZC3H12CQ9C0D7 883 aaKnown RBP20.66■□□□□ 0.9
SDCBP-204ENST00000447182 LRRC4CQ9HCJ2 640 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 ERVK-5Q9HDB9 667 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 SLC40A1Q9NP59 571 aa20.66■□□□□ 0.9
SDCBP-204ENST00000447182 CHUKO15111 745 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 SLITRK3O94933 977 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 HSPA6P17066 643 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 ICA1Q05084 483 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 MAPK7Q13164 816 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 PRPF4BQ13523 1007 aaKnown RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 SHROOM1Q2M3G4 852 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 USH1GQ495M9 461 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 KIAA1755Q5JYT7 1200 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 TATDN1Q6P1N9 297 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 STXBP4Q6ZWJ1 553 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 OTOP1Q7RTM1 612 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 NEK9Q8TD19 979 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 PIGOQ8TEQ8 1089 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 CCDC114Q96M63 670 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 XPO6Q96QU8 1125 aaKnown RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 THAP2Q9H0W7 228 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 IKZF4Q9H2S9 585 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 PI4KBQ9UBF8 816 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 FRMD4BQ9Y2L6 1034 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 MIF4GDA9UHW6 222 aaKnown RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 DNM1LO00429 736 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 KIAA0391O15091 583 aaKnown RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 CAND2O75155 1236 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 MUTP22033 750 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 ZNF76P36508 570 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 PMS2P54278 862 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 SNAP25P60880 206 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 IRX3P78415 501 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-204ENST00000447182 C11orf63Q6NUN7 778 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 TMEM179Q6ZVK1 233 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 JAMLQ86YT9 394 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 CHMP6Q96FZ7 201 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 FAM129AQ9BZQ8 928 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 AGPAT3Q9NRZ7 376 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 RASAL2Q9UJF2 1139 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 COG5Q9UP83 839 aa20.65■□□□□ 0.9
SDCBP-204ENST00000447182 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 GBP1P32455 592 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 PPP2R5CQ13362 524 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 CTTNQ14247 550 aaKnown RBP20.64■□□□□ 0.89
SDCBP-204ENST00000447182 COG2Q14746 738 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 ZDHHC24Q6UX98 284 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 BTNL9Q6UXG8 535 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 CPLX4Q7Z7G2 160 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 SLC9A9Q8IVB4 645 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 ALG3Q92685 438 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 ZDHHC15Q96MV8 337 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 LRRC4BQ9NT99 713 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 TAS2R14Q9NYV8 317 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 KCND2Q9NZV8 630 aa20.64■□□□□ 0.89
SDCBP-204ENST00000447182 PFASO15067 1338 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CCDC169A6NNP5 214 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 GHRP10912 638 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CRKP46108 304 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 MYL7Q01449 175 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 KCTD19Q17RG1 926 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-204ENST00000447182 FAM182BQ5T319 152 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CROCCP2Q86T23 111 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 GLG1Q92896 1179 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 NGLY1Q96IV0 654 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 KDM4CQ9H3R0 1056 aa20.63■□□□□ 0.89
SDCBP-204ENST00000447182 CNOT7Q9UIV1 285 aaKnown RBP20.63■□□□□ 0.89
SDCBP-204ENST00000447182 ODF2LQ9ULJ1 636 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms