RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 KSR1Q8IVT5 923 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 ADGRA3Q8IWK6 1321 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 FAM178BQ8IXR5 827 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 FAM126BQ8IXS8 530 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 NME8Q8N427 588 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 WNT8BQ93098 351 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 GDAQ9Y2T3 454 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 B4GALT4O60513 344 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 CD4P01730 458 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 TYRO3Q06418 890 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 DMP1Q13316 513 aaPredicted RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 PPP2R5AQ15172 486 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 DPCR1Q3MIW9 517 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 RHPN2Q8IUC4 686 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 TMEM161BQ8NDZ6 487 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 DNAJB3Q8WWF6 145 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
CCNE1-203ENST00000444983 NFKBIZQ9BYH8 718 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 IFT122Q9HBG6 1241 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
CCNE1-203ENST00000444983 SIP14410 1827 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 GPR32O75388 356 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 GPC3P51654 580 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 GTF2BQ00403 316 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 CDC42EP1Q00587 391 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 PTK7Q13308 1070 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 TRIM71Q2Q1W2 868 aaKnown RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 CDCA2Q69YH5 1023 aaPredicted RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 IFNLR1Q8IU57 520 aaPredicted RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 SLC17A8Q8NDX2 589 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 SCFD1Q8WVM8 642 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 MAP7D2Q96T17 732 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
CCNE1-203ENST00000444983 MRPL44Q9H9J2 332 aaKnown RBP16.68■□□□□ 0.26
CCNE1-203ENST00000444983 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
CCNE1-203ENST00000444983 VTNP04004 478 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 RPLP2P05387 115 aaKnown RBP16.67■□□□□ 0.26
CCNE1-203ENST00000444983 CCDC192P0DO97 292 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
CCNE1-203ENST00000444983 SCP2P22307 547 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 HOXD13P35453 343 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 PRCPP42785 496 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 SMTNP53814 917 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 ZNF507Q8TCN5 953 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 DHX38Q92620 1227 aaKnown RBP16.67■□□□□ 0.26
CCNE1-203ENST00000444983 TOX2Q96NM4 488 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 FAM49AQ9H0Q0 323 aaPredicted RBP16.67■□□□□ 0.26
CCNE1-203ENST00000444983 C11orf49Q9H6J7 331 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 KMT5AQ9NQR1 393 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 AKT3Q9Y243 479 aa16.67■□□□□ 0.26
CCNE1-203ENST00000444983 EIF3DO15371 548 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCNE1-203ENST00000444983 SLC16A4O15374 487 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 MYBP10242 640 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 PTENP60484 403 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 STX1AQ16623 288 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 ZC2HC1CQ53FD0 456 aaPredicted RBP16.66■□□□□ 0.26
CCNE1-203ENST00000444983 TAS1R3Q7RTX0 852 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
CCNE1-203ENST00000444983 RNF149Q8NC42 400 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
CCNE1-203ENST00000444983 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 SRGAP2CP0DJJ0 459 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 NLRP11P59045 1033 aaKnown RBP16.65■□□□□ 0.26
CCNE1-203ENST00000444983 RBL2Q08999 1139 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 KCNA1Q09470 495 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 ALCAMQ13740 583 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 ANP32EQ9BTT0 268 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 TMEM134Q9H6X4 195 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 A0A087WZ62 844 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 LRRIQ4A6NIV6 560 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 H0YCG3 227 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 K7ENM7 598 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 GCNT3O95395 438 aa16.65■□□□□ 0.26
CCNE1-203ENST00000444983 ATN1P54259 1190 aaPredicted RBP16.65■□□□□ 0.26
CCNE1-203ENST00000444983 TFDP1Q14186 410 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms