RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CALR3Q96L12 384 aaKnown RBP20.51■□□□□ 0.87
PMPCB-204ENST00000444457 ZNF570Q96NI8 536 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 NOP53Q9NZM5 478 aaKnown RBP20.51■□□□□ 0.87
PMPCB-204ENST00000444457 L3MBTL1Q9Y468 752 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 TLR2O60603 784 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 CLTAP09496 248 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 FLT3P36888 993 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SREBF1P36956 1147 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
PMPCB-204ENST00000444457 EDRF1Q3B7T1 1238 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 KRT71Q3SY84 523 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SFMBT2Q5VUG0 894 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 AGAP11Q8TF27 550 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SAAL1Q96ER3 474 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 ZHX3Q9H4I2 956 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SERPINA10Q9UK55 444 aa20.51■□□□□ 0.87
PMPCB-204ENST00000444457 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 SERPING1P05155 500 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 RPA1P27694 616 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 POLR2FP61218 127 aaKnown RBP20.5■□□□□ 0.87
PMPCB-204ENST00000444457 PSMC6P62333 389 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 ADAM9Q13443 819 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 CAPRIN2Q6IMN6 1127 aaKnown RBP20.5■□□□□ 0.87
PMPCB-204ENST00000444457 MIS18BP1Q6P0N0 1132 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 ACTRT1Q8TDG2 376 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 FAM86B1E9PN63 330 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 F8VZ95 297 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
PMPCB-204ENST00000444457 FOSP01100 380 aaPredicted RBP20.5■□□□□ 0.87
PMPCB-204ENST00000444457 FAM86B2P0C5J1 330 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 SPATA31C1P0DKV0 1188 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 GIT2Q14161 759 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 PNMA8AQ86V59 439 aaPredicted RBP20.5■□□□□ 0.87
PMPCB-204ENST00000444457 TAF4BQ92750 862 aa20.5■□□□□ 0.87
PMPCB-204ENST00000444457 SMCHD1A6NHR9 2005 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 LIN7AO14910 233 aaPredicted RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 SART1O43290 800 aaKnown RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 CASP5P51878 434 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 PABPC4Q13310 644 aaKnown RBP eCLIP20.49■□□□□ 0.874e-8■□□□□ 10
PMPCB-204ENST00000444457 SYT2Q8N9I0 419 aaPredicted RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 MDM1Q8TC05 714 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 DNM3Q9UQ16 869 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 ATRNL1Q5VV63 1379 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 KIF13BQ9NQT8 1826 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 MEIS1O00470 390 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 CETN3O15182 167 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 TAL1P17542 331 aaPredicted RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 SLC18A3Q16572 532 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 AP1ARQ63HQ0 302 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 TBC1D1Q86TI0 1168 aaPredicted RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 PBKQ96KB5 322 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
PMPCB-204ENST00000444457 CORO1CQ9ULV4 474 aaPredicted RBP20.49■□□□□ 0.87
PMPCB-204ENST00000444457 KCNK3O14649 394 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 BMP3P12645 472 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 NR2F2P24468 414 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 EIF3BP55884 814 aaKnown RBP20.48■□□□□ 0.87
PMPCB-204ENST00000444457 JAG1P78504 1218 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 RPS6KA1Q15418 735 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 SPDYCQ5MJ68 293 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 SEC14L1Q92503 715 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 CNKSR1Q969H4 720 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 REEP2Q9BRK0 252 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 TDRD3Q9H7E2 651 aaKnown RBP20.48■□□□□ 0.87
PMPCB-204ENST00000444457 GH2P01242 217 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 CIITAP33076 1130 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 SFR1Q86XK3 245 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 ATXN2LQ8WWM7 1075 aaKnown RBP20.48■□□□□ 0.87
PMPCB-204ENST00000444457 LRRC4CQ9HCJ2 640 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 SLC5A4Q9NY91 659 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 STK24Q9Y6E0 443 aa20.48■□□□□ 0.87
PMPCB-204ENST00000444457 BTNL10A8MVZ5 291 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 MSH4O15457 936 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 KIF4AO95239 1232 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 EPS15P42566 896 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 KCNH2Q12809 1159 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 TRPM8Q7Z2W7 1104 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 FLAD1Q8NFF5 587 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 GANQ9H2C0 597 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 TRAF3IP3Q9Y228 551 aa20.47■□□□□ 0.87
PMPCB-204ENST00000444457 MMEP08473 750 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 PEX19P40855 299 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 RAPGEF1Q13905 1077 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 KIAA0753Q2KHM9 967 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 RBM26Q5T8P6 1007 aaKnown RBP20.46■□□□□ 0.87
PMPCB-204ENST00000444457 ZNF219Q9P2Y4 722 aaPredicted RBP20.46■□□□□ 0.87
PMPCB-204ENST00000444457 VAV3Q9UKW4 847 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 PNMA2Q9UL42 364 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 CCDC188H7C350 402 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 PLSCR1O15162 318 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 DAPK3O43293 454 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 ENTPD3O75355 529 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 CHN1P15882 459 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 HOXA13P31271 388 aaPredicted RBP20.46■□□□□ 0.87
PMPCB-204ENST00000444457 KNOP1Q1ED39 458 aaKnown RBP20.46■□□□□ 0.87
PMPCB-204ENST00000444457 EPM2AIP1Q7L775 607 aaPredicted RBP20.46■□□□□ 0.87
PMPCB-204ENST00000444457 MICAL1Q8TDZ2 1067 aa20.46■□□□□ 0.87
PMPCB-204ENST00000444457 PGRMC1O00264 195 aaKnown RBP20.45■□□□□ 0.86
PMPCB-204ENST00000444457 ZBTB48P10074 688 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms