RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SPATA31C1P0DKV0 1188 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 GATMP50440 423 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 MXD4Q14582 209 aaPredicted RBP21■□□□□ 0.95
ATPAF2-201ENST00000444058 PCBP1Q15365 356 aaKnown RBP eCLIP21■□□□□ 0.95
ATPAF2-201ENST00000444058 PAN2Q504Q3 1202 aaKnown RBP21■□□□□ 0.95
ATPAF2-201ENST00000444058 SRGAP1Q7Z6B7 1085 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 FERMT3Q86UX7 667 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 ECHDC2Q86YB7 292 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 KSR1Q8IVT5 923 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 ERMNQ8TAM6 284 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 TMEM143Q96AN5 459 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 NLRP4Q96MN2 994 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 MTRQ99707 1265 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 POLR3CQ9BUI4 534 aaPredicted RBP21■□□□□ 0.95
ATPAF2-201ENST00000444058 AAASQ9NRG9 546 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 PLAGL2Q9UPG8 496 aa21■□□□□ 0.95
ATPAF2-201ENST00000444058 TBKBP1A7MCY6 615 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 GRM6O15303 877 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 CSDE1O75534 798 aaKnown RBP20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 SKIP12755 728 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 MUTP22033 750 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 TECP42680 631 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 RARRES1P49788 294 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 POU5F1BQ06416 359 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 LAMTOR4Q0VGL1 99 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 CSPP1Q1MSJ5 1256 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 ZNF598Q86UK7 904 aaKnown RBP20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 CATSPER3Q86XQ3 398 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 C4orf32Q8N8J7 132 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 NSUN3Q9H649 340 aaKnown RBP20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 XPNPEP1Q9NQW7 623 aa20.99■□□□□ 0.95
ATPAF2-201ENST00000444058 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 LAD1O00515 517 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 NCK2O43639 380 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 FGFR1P11362 822 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 FGFR4P22455 802 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 RPA1P27694 616 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 TOB1P50616 345 aaPredicted RBP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 FXR2P51116 673 aaKnown RBP eCLIP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 COL19A1Q14993 1142 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 CATSPER4Q7RTX7 472 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 CCDC43Q96MW1 224 aaKnown RBP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 NACC1Q96RE7 527 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 DBR1Q9UK59 544 aaKnown RBP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 PCDHB12Q9Y5F1 795 aa20.98■□□□□ 0.95
ATPAF2-201ENST00000444058 ZNF623O75123 536 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 SRGAP2CP0DJJ0 459 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 BMP1P13497 986 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 IBSPP21815 317 aaPredicted RBP20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 PHKA2P46019 1235 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 RAB27AP51159 221 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 TFF2Q03403 129 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 UBE3AQ05086 875 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 PDIA5Q14554 519 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 RILPL1Q5EBL4 403 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 HAUS3Q68CZ6 603 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 ABI1Q8IZP0 508 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 KLHL23Q8NBE8 558 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 SPPL3Q8TCT6 385 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 CASD1Q96PB1 797 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 AGPAT5Q9NUQ2 364 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 RNF19AQ9NV58 838 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 TYW1Q9NV66 732 aaKnown RBP20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 PIN4Q9Y237 131 aaKnown RBP20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 STK24Q9Y6E0 443 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 REV3LO60673 3130 aa20.97■□□□□ 0.95
ATPAF2-201ENST00000444058 ITGB1P05556 798 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 LAG3P18627 525 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 GJB2P29033 226 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 ARL2P36404 184 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 CAMK1Q14012 370 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 TFDP1Q14186 410 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 TWF2Q6IBS0 349 aaKnown RBP20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 IFNLR1Q8IU57 520 aaPredicted RBP20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 LRRC43Q8N309 656 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 PIGOQ8TEQ8 1089 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 NFKBIZQ9BYH8 718 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 BACH2Q9BYV9 841 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 RAB34Q9BZG1 259 aa20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 UBE2ZQ9H832 354 aaPredicted RBP20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 ALG13Q9NP73 1137 aaKnown RBP20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 FNDC1Q4ZHG4 1894 aaPredicted RBP20.96■□□□□ 0.95
ATPAF2-201ENST00000444058 MED24O75448 989 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 ATF7P17544 494 aaPredicted RBP20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 PRPHP41219 470 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 PTENP60484 403 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 PTGDRQ13258 359 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 TCEAL5Q5H9L2 206 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 MRPL9Q9BYD2 267 aaKnown RBP20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 CWH43Q9H720 699 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 BMP2KQ9NSY1 1161 aaPredicted RBP20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 FAM105AQ9NUU6 356 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 SMC3Q9UQE7 1217 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 PCDHB6Q9Y5E3 794 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 SPTBN5Q9NRC6 3674 aaKnown RBP20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 XIRP2A4UGR9 3374 aa20.95■□□□□ 0.94
ATPAF2-201ENST00000444058 ARID2Q68CP9 1835 aa20.94■□□□□ 0.94
ATPAF2-201ENST00000444058 H3BQV1 296 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms