RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 ZNF577Q9BSK1 485 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 AKT3Q9Y243 479 aa16.31■□□□□ 0.2
HMGN1-208ENST00000443046 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-208ENST00000443046 C2orf16Q68DN1 1984 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-208ENST00000443046 ADAMTS3O15072 1205 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 ZNF862O60290 1169 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 TDGQ13569 410 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 ANGPT1Q15389 498 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 GPR149Q86SP6 731 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 BCL7CQ8WUZ0 217 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-208ENST00000443046 IGSF21Q96ID5 467 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 FAM167AQ96KS9 214 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 VN1R3Q9BXE9 311 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 DACT1Q9NYF0 836 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 GABBR1Q9UBS5 961 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 DUSP12Q9UNI6 340 aa16.3■□□□□ 0.2
HMGN1-208ENST00000443046 CARNS1A5YM72 827 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 FGFR4P22455 802 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 PHKA2P46019 1235 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-208ENST00000443046 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
HMGN1-208ENST00000443046 JAKMIP3Q5VZ66 844 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 TRMT1LQ7Z2T5 733 aaKnown RBP16.29■□□□□ 0.2
HMGN1-208ENST00000443046 FLCNQ8NFG4 579 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 LENG9Q96B70 501 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-208ENST00000443046 RTP3Q9BQQ7 232 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 KCNK12Q9HB15 430 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-208ENST00000443046 BRPF3Q9ULD4 1205 aa16.29■□□□□ 0.2
HMGN1-208ENST00000443046 OTOGLQ3ZCN5 2332 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 GALTP07902 379 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 CIITAP33076 1130 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 TARBP2Q15633 366 aaKnown RBP16.28■□□□□ 0.2
HMGN1-208ENST00000443046 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 CABP7Q86V35 215 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 PPFIBP1Q86W92 1011 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 ACSF2Q96CM8 615 aaPredicted RBP16.28■□□□□ 0.2
HMGN1-208ENST00000443046 NRDE2Q9H7Z3 1164 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 CEP250Q9BV73 2442 aa16.28■□□□□ 0.2
HMGN1-208ENST00000443046 LILRB3O75022 631 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.2
HMGN1-208ENST00000443046 CSDE1O75534 798 aaKnown RBP16.27■□□□□ 0.2
HMGN1-208ENST00000443046 OATP04181 439 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 CLCN4P51793 760 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 RTN1Q16799 776 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 C15orf39Q6ZRI6 1047 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 CCDC149Q6ZUS6 474 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 ZMYND12Q9H0C1 365 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 SEMA4AQ9H3S1 761 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 NRBP2Q9NSY0 501 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 TBC1D13Q9NVG8 400 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 NCOR2Q9Y618 2525 aa16.27■□□□□ 0.2
HMGN1-208ENST00000443046 ESYT2A0FGR8 921 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 EDIL3O43854 480 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 N4BP1O75113 896 aaKnown RBP16.26■□□□□ 0.19
HMGN1-208ENST00000443046 ZNF623O75123 536 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 CA8P35219 290 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 CDC42EP1Q00587 391 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 DRP2Q13474 957 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 UGCGQ16739 394 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
HMGN1-208ENST00000443046 LETM2Q2VYF4 491 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 SIX5Q8N196 739 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 TMEM87AQ8NBN3 555 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 KLHL5Q96PQ7 755 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 IGSF9Q9P2J2 1179 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 WNT16Q9UBV4 365 aa16.26■□□□□ 0.19
HMGN1-208ENST00000443046 FANCMQ8IYD8 2048 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 IGKV6-21A0A0C4DH24 114 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 MEIS3P2A8K0S8 358 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 WDR64B1ANS9 1081 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 ZBTB43O43298 467 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 B4GALT3O60512 393 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 OFD1O75665 1012 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 CDC27P30260 824 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 SLC11A1P49279 550 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 PRKCEQ02156 737 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 PRR16Q569H4 304 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 CMASQ8NFW8 434 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-208ENST00000443046 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 LPPQ93052 612 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 NIFKQ9BYG3 293 aaKnown RBP16.25■□□□□ 0.19
HMGN1-208ENST00000443046 RHOBTB2Q9BYZ6 727 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 GCOM2Q9BZD3 368 aaPredicted RBP16.25■□□□□ 0.19
HMGN1-208ENST00000443046 DNAJB4Q9UDY4 337 aa16.25■□□□□ 0.19
HMGN1-208ENST00000443046 STK39Q9UEW8 545 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms