RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 PNMA5Q96PV4 448 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 YME1L1Q96TA2 773 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 ADAM2Q99965 735 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 SLC28A3Q9HAS3 691 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 SQORQ9Y6N5 450 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 TTC3P53804 2025 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 NLRC5Q86WI3 1866 aa13.55□□□□□ -0.24
SLC48A1-202ENST00000442892 SZT2Q5T011 3432 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 INO80B-WBP1J3KQ70 363 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 ENPP3O14638 875 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 SPTLC2O15270 562 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 MGEA5O60502 916 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 PLCG1P19174 1290 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 CAPSQ13938 189 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 MXD4Q14582 209 aaPredicted RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 TMEM132AQ24JP5 1023 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 LINC01599Q8WXQ3 324 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 INO80BQ9C086 356 aaPredicted RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 TMX1Q9H3N1 280 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 PIN4Q9Y237 131 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-202ENST00000442892 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 ASAP2O43150 1006 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 ERLIN2O94905 339 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 GJB5O95377 273 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 CYP11B2P19099 503 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 GLRA2P23416 452 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 NASPP49321 788 aaPredicted RBP13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 TMEM119Q4V9L6 283 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 PAN2Q504Q3 1202 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 USP49Q70CQ1 688 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 LINC00301Q8NCQ3 95 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 CHAMP1Q96JM3 812 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 RUSC1Q9BVN2 902 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 CCDC39Q9UFE4 941 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
SLC48A1-202ENST00000442892 BRD1O95696 1058 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 STAG3L1P0CL83 205 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 ARL2P36404 184 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 ME1P48163 572 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 LONRF3Q496Y0 759 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 SRGAP1Q7Z6B7 1085 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 ZBTB8OSQ8IWT0 167 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 DEPTORQ8TB45 409 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 TOP1MTQ969P6 601 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 IFT74Q96LB3 600 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 RAD9AQ99638 391 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 PANK2Q9BZ23 570 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 TTYH1Q9H313 450 aaPredicted RBP13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 ZNF576Q9H609 170 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 MINDY3Q9H8M7 445 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 IFT122Q9HBG6 1241 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
SLC48A1-202ENST00000442892 FNDC1Q4ZHG4 1894 aaPredicted RBP13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 CCDC169A6NNP5 214 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 HIP1RO75146 1068 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 YEATS4O95619 227 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 SARSP49591 514 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 MCM6Q14566 821 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 HYIQ5T013 277 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 RRAGBQ5VZM2 374 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 RINT1Q6NUQ1 792 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 PDILTQ8N807 584 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 KCNG4Q8TDN1 519 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 ARNTL2Q8WYA1 636 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 BSNDQ8WZ55 320 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 CPB2Q96IY4 423 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 KIFC3Q9BVG8 833 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 RGS18Q9NS28 235 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 ZDHHC9Q9Y397 364 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
SLC48A1-202ENST00000442892 SFI1A8K8P3 1242 aa13.5□□□□□ -0.25
SLC48A1-202ENST00000442892 ARHGEF15O94989 841 aa13.5□□□□□ -0.25
SLC48A1-202ENST00000442892 STAT6P42226 847 aa13.5□□□□□ -0.25
SLC48A1-202ENST00000442892 GATMP50440 423 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms