RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CCNG1P51959 295 aa18.15■□□□□ 0.5
PMS1-213ENST00000441310 FITM2Q8N6M3 262 aa18.15■□□□□ 0.5
PMS1-213ENST00000441310 METTL13Q8N6R0 699 aa18.15■□□□□ 0.5
PMS1-213ENST00000441310 COA7Q96BR5 231 aa18.15■□□□□ 0.5
PMS1-213ENST00000441310 ROBO3Q96MS0 1386 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 SMCO2A6NFE2 343 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 TTC36A6NLP5 189 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 NPTXRO95502 500 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 POLR2FP61218 127 aaKnown RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 ADAT2Q7Z6V5 191 aaKnown RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 ETNK1Q9HBU6 452 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 CNGA1P29973 690 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 LRRC23Q53EV4 343 aaPredicted RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 DENND2CQ68D51 928 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 DAAM2Q86T65 1068 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 ZNF513Q8N8E2 541 aaPredicted RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.14■□□□□ 0.492e-8■□□□□ 9.3
PMS1-213ENST00000441310 ZMYND12Q9H0C1 365 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 CHCHD3Q9NX63 227 aaKnown RBP18.14■□□□□ 0.49
PMS1-213ENST00000441310 TMEM260Q9NX78 707 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 LAMB1P07942 1786 aa18.14■□□□□ 0.49
PMS1-213ENST00000441310 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SERPING1P05155 500 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SLC16A2P36021 539 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 UBAP2Q5T6F2 1119 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 FAM81AQ8TBF8 368 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 AKT1S1Q96B36 256 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 PLCG1P19174 1290 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SP100P23497 879 aaPredicted RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 PLS1Q14651 629 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 ARL6IP4Q66PJ3 421 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 CDC42EP5Q6NZY7 148 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 C4orf32Q8N8J7 132 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 KIAA0895Q8NCT3 520 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 ACTRT1Q8TDG2 376 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 RBM41Q96IZ5 413 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 TRIM9Q9C026 710 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 FAM114A2Q9NRY5 505 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 LRRC42Q9Y546 428 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 ASB3Q9Y575 518 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 FLOT1O75955 427 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 USP11P51784 963 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 KLC1Q07866 573 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 NEK9Q8TD19 979 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 EPS8L3Q8TE67 593 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 ZFAND2BQ8WV99 257 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 DDX23Q9BUQ8 820 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 PCMTD2Q9NV79 361 aa18.13■□□□□ 0.49
PMS1-213ENST00000441310 SEC63Q9UGP8 760 aaKnown RBP18.13■□□□□ 0.49
PMS1-213ENST00000441310 CCDC169A6NNP5 214 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 PPFIA2O75334 1257 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 COPB2P35606 906 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 KCNMA1Q12791 1236 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 SLC29A2Q14542 456 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 FAM83BQ5T0W9 1011 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 TTBK2Q6IQ55 1244 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 FAM133AQ8N9E0 248 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 RNF25Q96BH1 459 aaPredicted RBP18.12■□□□□ 0.49
PMS1-213ENST00000441310 PPP1R12CQ9BZL4 782 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 DBR1Q9UK59 544 aaKnown RBP18.12■□□□□ 0.49
PMS1-213ENST00000441310 GNAZP19086 355 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 ATP6V1C1P21283 382 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 PMS2P54278 862 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 PLTPP55058 493 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 GBP7Q8N8V2 638 aaPredicted RBP18.12■□□□□ 0.49
PMS1-213ENST00000441310 LSM14BQ9BX40 385 aaKnown RBP18.12■□□□□ 0.49
PMS1-213ENST00000441310 EPB41L4BQ9H329 900 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 SERPINB13Q9UIV8 391 aa18.12■□□□□ 0.49
PMS1-213ENST00000441310 CCNT1O60563 726 aaKnown RBP18.11■□□□□ 0.49
PMS1-213ENST00000441310 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 KLHL30Q0D2K2 578 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 HHATQ5VTY9 493 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 ASRGL1Q7L266 308 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 OTUD6AQ7L8S5 288 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 RMDN2Q96LZ7 410 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 RNPEPL1Q9HAU8 725 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 MTMR4Q9NYA4 1195 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 MAST2Q6P0Q8 1798 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 CNGA2Q16280 664 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 PGM2Q96G03 612 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 BHMG1C9JSJ3 638 aaPredicted RBP18.11■□□□□ 0.49
PMS1-213ENST00000441310 CCDC188H7C350 402 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 CALB2P22676 271 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 PHC3Q8NDX5 983 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
PMS1-213ENST00000441310 UTP4Q969X6 686 aaKnown RBP18.11■□□□□ 0.49
PMS1-213ENST00000441310 FAM170AA1A519 330 aa18.1■□□□□ 0.49
PMS1-213ENST00000441310 OAS1P00973 400 aaKnown RBP18.1■□□□□ 0.49
PMS1-213ENST00000441310 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
PMS1-213ENST00000441310 APOBEC3HQ6NTF7 200 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms