RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 FBLN7Q53RD9 439 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 FAM117BQ6P1L5 589 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 XKR5Q6UX68 686 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF574Q6ZN55 896 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 SPRED2Q7Z698 418 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF589Q86UQ0 364 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 METTL16Q86W50 562 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF384Q8TF68 577 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 FBLIM1Q8WUP2 373 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 CHAMP1Q96JM3 812 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 SAMD11Q96NU1 681 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 SEC62Q99442 399 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 MMP19Q99542 508 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 TMPRSS13Q9BYE2 586 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 FTOQ9C0B1 505 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 TRPV6Q9H1D0 765 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 NSUN3Q9H649 340 aaKnown RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 RPAP3Q9H6T3 665 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ABCF2Q9UG63 623 aa5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ZHX1Q9UKY1 873 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-206ENST00000441089 ITPR1Q14643 2758 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ATG2AQ2TAZ0 1938 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 TCRBV5S4A2TA0A5A2 114 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 LCHNA4D1U4 455 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 LINC01553A4QN01 128 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 MEGF11A6BM72 1044 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 M0R2C6 588 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 FOXP2O15409 715 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 RNF113AO15541 343 aaKnown RBP5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ZEB2O60315 1214 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 B4GALT4O60513 344 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 GJB5O95377 273 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 PDE6AP16499 860 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 PCSK2P16519 638 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 MPSTP25325 297 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 COPB2P35606 906 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ADD2P35612 726 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 PTH1RQ03431 593 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 KIAA0319Q5VV43 1072 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ALKBH2Q6NS38 261 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 CWC27Q6UX04 472 aaKnown RBP5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF438Q7Z4V0 828 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 RPAINQ86UA6 219 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ATCAYQ86WG3 371 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 TEX11Q8IYF3 940 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 KIAA2013Q8IYS2 634 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 RETREG2Q8NC44 543 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 KCNG4Q8TDN1 519 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 EDEM1Q92611 657 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 NOL10Q9BSC4 688 aaKnown RBP5.62□□□□□ -1.51
PTPN4-206ENST00000441089 TANGO6Q9C0B7 1094 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 LSG1Q9H089 658 aaKnown RBP5.62□□□□□ -1.51
PTPN4-206ENST00000441089 ABHD16BQ9H3Z7 469 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 DIAPH3Q9NSV4 1193 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 SOX13Q9UN79 622 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 PDS5AQ29RF7 1337 aaKnown RBP5.62□□□□□ -1.51
PTPN4-206ENST00000441089 MYH8P13535 1937 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 SPTA1P02549 2419 aa5.62□□□□□ -1.51
PTPN4-206ENST00000441089 SPEGQ15772 3267 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 LOC100289279A0A1B0GTE1 492 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 LOC730098B7Z3J9 87 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 EFCAB14O75071 495 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 IDH1O75874 414 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 GH2P01242 217 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 LMNAP02545 664 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 PDGFAP04085 211 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 HLA-DOAP06340 250 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 PGK2P07205 417 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 JUNBP17275 347 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 NPR3P17342 541 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 MZF1P28698 734 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 EIF1AXP47813 144 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 MECOMQ03112 1051 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 CBX2Q14781 532 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 TTF1Q15361 905 aaPredicted RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 UBE3CQ15386 1083 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 NFKBIBQ15653 356 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 LRRFIP1Q32MZ4 808 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 CCDC144BQ3MJ40 725 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 TCEAL5Q5H9L2 206 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 CXCL17Q6UXB2 119 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 MAMDC4Q6UXC1 1216 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 IGSF10Q6WRI0 2623 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 ERICH6Q7L0X2 663 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 ADGRA1Q86SQ6 560 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 MAGEB6Q8N7X4 407 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 FLCNQ8NFG4 579 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 APPBP2Q92624 585 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 RAD50Q92878 1312 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 RIPOR3Q96MK2 946 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 TBC1D32Q96NH3 1257 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 PUS7LQ9H0K6 701 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 ZNF532Q9HCE3 1301 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 OSGEPQ9NPF4 335 aa5.61□□□□□ -1.51
PTPN4-206ENST00000441089 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
PTPN4-206ENST00000441089 CD207Q9UJ71 328 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms