RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RABEP1Q15276 862 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 TWF2Q6IBS0 349 aaKnown RBP22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 CATSPER4Q7RTX7 472 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 THNSL1Q8IYQ7 743 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 LRRC43Q8N309 656 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 TCP11Q8WWU5 503 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 CEP89Q96ST8 783 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 EIF2AK1Q9BQI3 630 aaKnown RBP22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 TMEM117Q9H0C3 514 aa22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 WRAP73Q9P2S5 460 aaPredicted RBP22.18■■□□□ 1.14
SHROOM1-204ENST00000440118 NCK2O43639 380 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 GAS2O43903 313 aaKnown RBP22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 ITGB1P05556 798 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 LAG3P18627 525 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 SPIRE1Q08AE8 756 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 CSPP1Q1MSJ5 1256 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 ECHDC2Q86YB7 292 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 KSR1Q8IVT5 923 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 TMEM143Q96AN5 459 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 MTRQ99707 1265 aa22.17■■□□□ 1.14
SHROOM1-204ENST00000440118 H3BQ06 376 aaPredicted RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 RBM25P49756 843 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 FAM189BP81408 668 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 LEXMQ3ZCV2 418 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 POF1BQ8WVV4 589 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 PABPC5Q96DU9 382 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 KIF2CQ99661 725 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 IGFLR1Q9H665 355 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 DHX33Q9H6R0 707 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 CHST12Q9NRB3 414 aa22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 TYW1Q9NV66 732 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 NOL7Q9UMY1 257 aaKnown RBP22.16■■□□□ 1.14
SHROOM1-204ENST00000440118 POTEMA6NI47 508 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 WNT7AO00755 349 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 SRGAP2CP0DJJ0 459 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 ZNF579Q8NAF0 562 aaKnown RBP22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 COLGALT1Q8NBJ5 622 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 MICAL1Q8TDZ2 1067 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 FOXP1Q9H334 677 aaPredicted RBP22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 KIF3AQ9Y496 699 aa22.15■■□□□ 1.14
SHROOM1-204ENST00000440118 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 A0A0U1RQF3 1178 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 SKIP12755 728 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 PTCRAQ6ISU1 281 aaPredicted RBP22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 FBXO18Q8NFZ0 1043 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 SPPL3Q8TCT6 385 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 PRPF31Q8WWY3 499 aaKnown RBP22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 MRPL9Q9BYD2 267 aaKnown RBP22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 HCSTQ9UBK5 93 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 FAM50BQ9Y247 325 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 MUC3AQ02505 3323 aa22.14■■□□□ 1.13
SHROOM1-204ENST00000440118 FGF18O76093 207 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 SLITRK3O94933 977 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 EOMESO95936 686 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 OR52Z1P0C646 297 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 PHKA2P46019 1235 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 LAMTOR4Q0VGL1 99 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 PUS10Q3MIT2 529 aaKnown RBP22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 RNF149Q8NC42 400 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 ERMNQ8TAM6 284 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 HELQQ8TDG4 1101 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 ZNF558Q96NG5 402 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 TMEM60Q9H2L4 133 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 TLR9Q9NR96 1032 aa22.13■■□□□ 1.13
SHROOM1-204ENST00000440118 ZBTB39O15060 712 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 ERLIN2O94905 339 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 DNAJB1P25685 340 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 PPM1AP35813 382 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 RAB27AP51159 221 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 UBE3AQ05086 875 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 HYAL1Q12794 435 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 ORC2Q13416 577 aaPredicted RBP22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 TFDP1Q14186 410 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 ZNF174Q15697 407 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 TTC38Q5R3I4 469 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 SRGAP1Q7Z6B7 1085 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 NOSTRINQ8IVI9 506 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 CASD1Q96PB1 797 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 MTMR9Q96QG7 549 aa22.12■■□□□ 1.13
SHROOM1-204ENST00000440118 ASAP2O43150 1006 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 DGAT1O75907 488 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 NDUFV1P49821 464 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 MXD4Q14582 209 aaPredicted RBP22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 LONRF3Q496Y0 759 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 CLLU1OSQ5K130 101 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 FERMT3Q86UX7 667 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 HSD17B14Q9BPX1 270 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 IFT122Q9HBG6 1241 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 ANKEF1Q9NU02 776 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 AGPAT5Q9NUQ2 364 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 FAM105AQ9NUU6 356 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 PUF60Q9UHX1 559 aaKnown RBP22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 INPP5FQ9Y2H2 1132 aa22.11■■□□□ 1.13
SHROOM1-204ENST00000440118 LYPLA2O95372 231 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 SSTR3P32745 418 aaPredicted RBP22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 IRS1P35568 1242 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 TECP42680 631 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 CAMK1Q14012 370 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 CLUL1Q15846 466 aa22.1■■□□□ 1.13
SHROOM1-204ENST00000440118 GLB1LQ6UWU2 654 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms