RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SUSD4Q5VX71 490 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PAPD7Q5XG87 772 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 USP17L2Q6R6M4 530 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 TBC1D1Q86TI0 1168 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 NLRP7Q8WX94 980 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ADPGKQ9BRR6 497 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 TRIM9Q9C026 710 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CCSER1Q9C0I3 900 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 LACRTQ9GZZ8 138 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 DDX47Q9H0S4 455 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 MAP3K20Q9NYL2 800 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 DUSP10Q9Y6W6 482 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 XDHP47989 1333 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PVALEFA0A1B0GWK0 134 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ARHGEF37A1IGU5 675 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 GRID2IPA4D2P6 1211 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 M0QZ92 97 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PFDN1O60925 122 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 RHOBTB3O94955 611 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CSF1RP07333 972 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CARSP49589 748 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 VPS41P49754 854 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 KLK7P49862 253 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 RPS6KA2Q15349 733 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ANKRD20A4Q4UJ75 823 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ANKRD20A8PQ5CZ79 823 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ANKRD20A2Q5SQ80 823 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ANKRD20A1Q5TYW2 823 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 NEK10Q6ZWH5 1172 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 C11orf96Q7Z7L8 435 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PEX5LQ8IYB4 626 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 SDCCAG3Q96C92 435 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ZNF512BQ96KM6 892 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 TSC22D3Q99576 134 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PLA2G12BQ9BX93 195 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 AMNQ9BXJ7 453 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 EPS15L1Q9UBC2 864 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 SPATA31D1Q6ZQQ2 1576 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 SLIT1O75093 1534 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PDS5AQ29RF7 1337 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 FOXP2O15409 715 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 TTI1O43156 1089 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 B3GALNT1O75752 331 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 GFPT2O94808 682 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PPM1FP49593 454 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 SEC24CP53992 1094 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 STK4Q13043 487 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PRR16Q569H4 304 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 KRT39Q6A163 491 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CTAGE3PQ8IX95 158 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 RHOT2Q8IXI1 618 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 DCLK2Q8N568 766 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 GSDMBQ8TAX9 411 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 KAT2BQ92831 832 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 COA7Q96BR5 231 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 ELAC2Q9BQ52 826 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 ZMYND12Q9H0C1 365 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CPVLQ9H3G5 476 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 NRBP2Q9NSY0 501 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 DMGDHQ9UI17 866 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 OVOS2A0A0G2JMS6 1433 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 A0A0U1RQJ8 604 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 FAM237AA0A1B0GTK4 181 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 MIF4GDA9UHW6 222 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 PODXLO00592 558 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 FGGP02679 453 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 SRGAP2BP0DMP2 458 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 LIG4P49917 911 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CAV1Q03135 178 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 DMP1Q13316 513 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 KRT81Q14533 505 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 C6orf118Q5T5N4 469 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 CCSAPQ6IQ19 270 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 CASC4Q6P4E1 433 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PDXDC1Q6P996 788 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 MAEAQ7L5Y9 396 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PROM2Q8N271 834 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 GUF1Q8N442 669 aaKnown RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 CHCHD4Q8N4Q1 142 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 GIMAP8Q8ND71 665 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 ZKSCAN4Q969J2 545 aaPredicted RBP6.82□□□□□ -1.32
BDNF-211ENST00000439476 DNAJC7Q99615 494 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 EDEM3Q9BZQ6 932 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 USTQ9Y2C2 406 aa6.82□□□□□ -1.32
BDNF-211ENST00000439476 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.81□□□□□ -1.32
BDNF-211ENST00000439476 CFBP00751 764 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 SKIP12755 728 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 DR1Q01658 176 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 CYP4A11Q02928 519 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 CUL3Q13618 768 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 TFDP1Q14186 410 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 KRT72Q14CN4 511 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 TPH2Q8IWU9 490 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 PTPN22Q9Y2R2 807 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 POTEMA6NI47 508 aa6.81□□□□□ -1.32
BDNF-211ENST00000439476 H0YIN7 160 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms