RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 GLRA2P23416 452 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 NPTX2P47972 431 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 CLCN3P51790 818 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 NLRP12P59046 1061 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF445P59923 1031 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 CACNB1Q02641 598 aaPredicted RBP14□□□□□ -0.17
SCLT1-202ENST00000439369 RBL2Q08999 1139 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 STX1AQ16623 288 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 FAM43BQ6ZT52 329 aaPredicted RBP14□□□□□ -0.17
SCLT1-202ENST00000439369 MAEAQ7L5Y9 396 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 CCDC155Q8N6L0 562 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 FIZ1Q96SL8 496 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 SENP6Q9GZR1 1112 aaPredicted RBP14□□□□□ -0.17
SCLT1-202ENST00000439369 KMT5AQ9NQR1 393 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 DACH1Q9UI36 760 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 NOD1Q9Y239 953 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 AKT3Q9Y243 479 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 PCDHB13Q9Y5F0 798 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 KAT6AQ92794 2004 aa14□□□□□ -0.17
SCLT1-202ENST00000439369 CD4P01730 458 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 PHKA2P46019 1235 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 PEX3P56589 373 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 DRP2Q13474 957 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 STIM1Q13586 685 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 CAPSQ13938 189 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 BMT2Q1RMZ1 405 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 CDCA2Q69YH5 1023 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 FOXR2Q6PJQ5 311 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 RUFY4Q6ZNE9 571 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 EPM2AIP1Q7L775 607 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF720Q7Z2F6 126 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 UBE2Q1Q7Z7E8 422 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 FAM126BQ8IXS8 530 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 GUF1Q8N442 669 aaKnown RBP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 DEPTORQ8TB45 409 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 STRA6Q9BX79 667 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 MRPL44Q9H9J2 332 aaKnown RBP13.99□□□□□ -0.17
SCLT1-202ENST00000439369 ARHGAP28Q9P2N2 729 aa13.99□□□□□ -0.17
SCLT1-202ENST00000439369 SYCE3A1L190 88 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 LRRIQ4A6NIV6 560 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 CCDC169A6NNP5 214 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 SFI1A8K8P3 1242 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 DCDC2CA8MYV0 355 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 BIN1O00499 593 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 PPP1R37O75864 691 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 GPC3P51654 580 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 SOX10P56693 466 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF200P98182 395 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-202ENST00000439369 GTF2BQ00403 316 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 TYRO3Q06418 890 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 STK4Q13043 487 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 RHPN2Q8IUC4 686 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 ZBTB8OSQ8IWT0 167 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 KIAA0895Q8NCT3 520 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 TMEM161BQ8NDZ6 487 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 CAGE1Q8TC20 777 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 DNAJB3Q8WWF6 145 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 BSNDQ8WZ55 320 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 PAWRQ96IZ0 340 aaKnown RBP13.98□□□□□ -0.17
SCLT1-202ENST00000439369 FUCA2Q9BTY2 467 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 INO80BQ9C086 356 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-202ENST00000439369 TMEM134Q9H6X4 195 aa13.98□□□□□ -0.17
SCLT1-202ENST00000439369 K7ENM7 598 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 M0QZ92 97 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 B4GALT4O60513 344 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 GPR32O75388 356 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 BMP6P22004 513 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 CRYBB1P53674 252 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 PTENP60484 403 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 FAM26DQ5JW98 314 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 MYOCDQ8IZQ8 938 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 ADSSL1Q8N142 457 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 ZNF507Q8TCN5 953 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 DIS3LQ8TF46 1054 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 DHTKD1Q96HY7 919 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 GCOM2Q9BZD3 368 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 NAT10Q9H0A0 1025 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 FAM49AQ9H0Q0 323 aaPredicted RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 ADAMTS10Q9H324 1103 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 TMEM206Q9H813 350 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 SLC39A2Q9NP94 309 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 TRMT13Q9NUP7 481 aaKnown RBP13.97□□□□□ -0.17
SCLT1-202ENST00000439369 EXOC7Q9UPT5 735 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 SQORQ9Y6N5 450 aa13.97□□□□□ -0.17
SCLT1-202ENST00000439369 PITPNM1O00562 1244 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 PSMA7O14818 248 aa13.96□□□□□ -0.17
SCLT1-202ENST00000439369 SLC16A4O15374 487 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms