RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CACNB2Q08289 660 aaPredicted RBP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 ARSHQ5FYA8 562 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 MFSD14CQ5VZR4 134 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 CNNM4Q6P4Q7 775 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 ANO5Q75V66 913 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 GAS2L3Q86XJ1 694 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 AFAP1L1Q8TED9 768 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 AFG1LQ8WV93 481 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 LENG1Q96BZ8 264 aaPredicted RBP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 ANP32EQ9BTT0 268 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 TRIM9Q9C026 710 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 BHMT2Q9H2M3 363 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 ZNF302Q9NR11 478 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 KIAA1522Q9P206 1035 aaPredicted RBP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 HOOK1Q9UJC3 728 aaKnown RBP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 DBR1Q9UK59 544 aaKnown RBP7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 MAN1B1Q9UKM7 699 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
LSM3P3-201ENST00000436601 IGSF9BQ9UPX0 1349 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 NPHP3-ACAD11A0A0J9YXS1 232 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 LRRC37A2A6NM11 1700 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 BIN1O00499 593 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 DYNC1LI2O43237 492 aaPredicted RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 KLRC4O43908 158 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 SMC2O95347 1197 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 RPN1P04843 607 aaKnown RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 SSBP05455 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 MYL1P05976 194 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 HOXD8P13378 290 aaPredicted RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 NPR3P17342 541 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 BMP6P22004 513 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 YWHABP31946 246 aaKnown RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 RARRES1P49788 294 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 STAT5BP51692 787 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 SKOR1P84550 965 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 AMPD3Q01432 767 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 TYRO3Q06418 890 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 MORC3Q14149 939 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 ARHGEF6Q15052 776 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 UTP14CQ5TAP6 766 aaKnown RBP7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 MAP3K21Q5TCX8 1036 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 ISM2Q6H9L7 571 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 LRSAM1Q6UWE0 723 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 C1orf186Q6ZWK4 172 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 DYMQ7RTS9 669 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 GPBP1Q86WP2 473 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 EHBP1Q8NDI1 1231 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 PPTC7Q8NI37 304 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 ATP6V0A1Q93050 837 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 SMARCE1Q969G3 411 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 DNAJC19Q96DA6 116 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 CCDC34Q96HJ3 373 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 GSDMAQ96QA5 445 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 SH2D3AQ9BRG2 576 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 RUSC1Q9BVN2 902 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 LRRC27Q9C0I9 530 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 ANKEF1Q9NU02 776 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 Q9Y3F1 56 aa7.82□□□□□ -1.16
LSM3P3-201ENST00000436601 EMSYQ7Z589 1322 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PLXNB2O15031 1838 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PVALEFA0A1B0GWK0 134 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 DKC1O60832 514 aaKnown RBP eCLIP7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PPFIA4O75335 1185 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 FAM13AO94988 1023 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 HMGCRP04035 888 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 INHAP05111 366 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 CCDC192P0DO97 292 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 AKR1A1P14550 325 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 VAMP1P23763 118 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 CCND3P30281 292 aaPredicted RBP7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PRMT2P55345 433 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 NPEPPSP55786 919 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 NLRP12P59046 1061 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PRKCEQ02156 737 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 GIT2Q14161 759 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 XKR3Q5GH77 459 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 FAM160B1Q5W0V3 765 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PLA2G4FQ68DD2 849 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 RINT1Q6NUQ1 792 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 SASS6Q6UVJ0 657 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 TRMT1LQ7Z2T5 733 aaKnown RBP7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 TLK2Q86UE8 772 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 RAET1EQ8TD07 263 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 CEP89Q96ST8 783 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 C16orf70Q9BSU1 422 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 NIFKQ9BYG3 293 aaKnown RBP7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 SMARCAD1Q9H4L7 1026 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 TRIM17Q9Y577 477 aa7.81□□□□□ -1.16
LSM3P3-201ENST00000436601 ZSWIM8A7E2V4 1837 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 TCHHQ07283 1943 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 FRMD3A2A2Y4 597 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 ARHGEF35A5YM69 484 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 SEPT4O43236 478 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 DUSP11O75319 330 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms