RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
CD44-209ENST00000433892 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
CD44-209ENST00000433892 ARHGEF26Q96DR7 871 aa12.82□□□□□ -0.36
CD44-209ENST00000433892 SYT11Q9BT88 431 aa12.82□□□□□ -0.36
CD44-209ENST00000433892 TMX2Q9Y320 296 aa12.82□□□□□ -0.36
CD44-209ENST00000433892 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 H0YGN5 161 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 H0YIN7 160 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 HIP1RO75146 1068 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 CHRNA5P30532 468 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 BFSP1Q12934 665 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 ITGB3BPQ13352 177 aaPredicted RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 CCDC26Q8TAB7 109 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 DPH5Q9H2P9 285 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 TMBIM4Q9HC24 238 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 GOPCQ9HD26 462 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 NFS1Q9Y697 457 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 NCANO14594 1321 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 TISP43B9A030 160 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 FOXN3O00409 490 aaPredicted RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 IPO5O00410 1097 aaKnown RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 TNFAIP3P21580 790 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 COPB2P35606 906 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 DLG4P78352 724 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 PPATQ06203 517 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 TRAF1Q13077 416 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 PPP2R5AQ15172 486 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 EMC10Q5UCC4 262 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 DAW1Q8N136 415 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 UBLCP1Q8WVY7 318 aaPredicted RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 WDR11Q9BZH6 1224 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 TRIM31Q9BZY9 425 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 FAM107BQ9H098 131 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 PCIF1Q9H4Z3 704 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 HERC5Q9UII4 1024 aaKnown RBP12.81□□□□□ -0.36
CD44-209ENST00000433892 ODF2LQ9ULJ1 636 aa12.81□□□□□ -0.36
CD44-209ENST00000433892 SLX4Q8IY92 1834 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 UBE4BO95155 1302 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 A0A087WUV0 522 aaPredicted RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 VGLL3A8MV65 326 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 PPP1R37O75864 691 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 LIG3P49916 1009 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 SEC24CP53992 1094 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 ZNF844Q08AG5 666 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 MAPK7Q13164 816 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 TTC31Q49AM3 519 aaPredicted RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 MICALL1Q8N3F8 863 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 C1orf131Q8NDD1 294 aaKnown RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 TRIM51Q9BSJ1 452 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 EPN3Q9H201 632 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 RANBP17Q9H2T7 1088 aaKnown RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 BCCIPQ9P287 314 aaKnown RBP eCLIP12.8□□□□□ -0.36
CD44-209ENST00000433892 COG5Q9UP83 839 aa12.8□□□□□ -0.36
CD44-209ENST00000433892 MRPL11Q9Y3B7 192 aaKnown RBP12.8□□□□□ -0.36
CD44-209ENST00000433892 YDJCA8MPS7 323 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 GUCY2CP25092 1073 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 ZNF211Q13398 564 aaPredicted RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 CHURC1Q8WUH1 139 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 KCND2Q9NZV8 630 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 UTP11Q9Y3A2 253 aaKnown RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 K7ENM7 598 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 MYO1FO00160 1098 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 TULP1O00294 542 aaPredicted RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 PTGISQ16647 500 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 PADI6Q6TGC4 694 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 B3GNT9Q6UX72 402 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 TMC3Q7Z5M5 1100 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 STRA6Q9BX79 667 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 EHMT1Q9H9B1 1298 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 UBE2TQ9NPD8 197 aaPredicted RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 TTC7AQ9ULT0 858 aaPredicted RBP12.79□□□□□ -0.36
CD44-209ENST00000433892 EMSYQ7Z589 1322 aa12.79□□□□□ -0.36
CD44-209ENST00000433892 ANKRD62A6NC57 917 aa12.78□□□□□ -0.36
CD44-209ENST00000433892 ITGB5P18084 799 aa12.78□□□□□ -0.36
CD44-209ENST00000433892 MUTP22033 750 aa12.78□□□□□ -0.36
CD44-209ENST00000433892 DHX9Q08211 1270 aaKnown RBP12.78□□□□□ -0.36
CD44-209ENST00000433892 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
CD44-209ENST00000433892 SLC9A9Q8IVB4 645 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms