RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 C1orf220Q5T0J3 134 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 C12orf56Q8IXR9 622 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 RDH13Q8NBN7 331 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 ZSWIM2Q8NEG5 633 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 TPCN2Q8NHX9 752 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 EXOC4Q96A65 974 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 ATG4CQ96DT6 458 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 CBWD1Q9BRT8 395 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 PCIF1Q9H4Z3 704 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 MED4Q9NPJ6 270 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 ERICH4A6NGS2 130 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 KIF4AO95239 1232 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 MYCLP12524 364 aaPredicted RBP18.5■□□□□ 0.55
CTSD-204ENST00000433655 ALCAMQ13740 583 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 C8orf74Q6P047 294 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 RNF207Q6ZRF8 634 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 SLFN11Q7Z7L1 901 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 C4orf19Q8IY42 314 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
CTSD-204ENST00000433655 RMDN3Q96TC7 470 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 GPRC5CQ9NQ84 441 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 INTUQ9ULD6 942 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 DOCK5Q9H7D0 1870 aa18.5■□□□□ 0.55
CTSD-204ENST00000433655 A0A0A6YYK5 440 aaPredicted RBP18.49■□□□□ 0.55
CTSD-204ENST00000433655 AGPSO00116 658 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 CES2O00748 559 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 H2AFZP0C0S5 128 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 GTF2BQ00403 316 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 H2AFVQ71UI9 128 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 REPS2Q8NFH8 660 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 PLEKHO2Q8TD55 490 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 ACCSQ96QU6 501 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 ST6GALNAC4Q9H4F1 302 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 TMEM206Q9H813 350 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 TMEM59LQ9UK28 342 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 ZBED4O75132 1171 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 LRRN2O75325 713 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 PPP3CAQ08209 521 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 GLE1Q53GS7 698 aaKnown RBP18.49■□□□□ 0.55
CTSD-204ENST00000433655 PLA2G4FQ68DD2 849 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 VPS36Q86VN1 386 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 GLYCTKQ8IVS8 523 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
CTSD-204ENST00000433655 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 GLI1P08151 1106 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 NOP2P46087 812 aaKnown RBP18.48■□□□□ 0.55
CTSD-204ENST00000433655 GALCP54803 685 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 NCKAP1LP55160 1127 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 SF3B2Q13435 895 aaKnown RBP18.48■□□□□ 0.55
CTSD-204ENST00000433655 RPS6KA1Q15418 735 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 NSMFQ6X4W1 530 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 HAUS6Q7Z4H7 955 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 USP38Q8NB14 1042 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 GDF3Q9NR23 364 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 ZNF112Q9UJU3 913 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 NCANO14594 1321 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 EMSYQ7Z589 1322 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 LCTP09848 1927 aa18.48■□□□□ 0.55
CTSD-204ENST00000433655 PHACTR2O75167 634 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 JAK3P52333 1124 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 NPEPPSP55786 919 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 BACE1P56817 501 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 PSMC5P62195 406 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 BAATQ14032 418 aaPredicted RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 KIF22Q14807 665 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 PTPROQ16827 1216 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 INTS8Q75QN2 995 aaKnown RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 SND1Q7KZF4 910 aaKnown RBP eCLIP18.47■□□□□ 0.555e-34■■■■■ 32
CTSD-204ENST00000433655 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 RIN2Q8WYP3 895 aaPredicted RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 CNOT7Q9UIV1 285 aaKnown RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 IGSF9BQ9UPX0 1349 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 ZSCAN5CA6NGD5 496 aaPredicted RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 KCNK3O14649 394 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 SLC16A4O15374 487 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 VAMP7P51809 220 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 PEX3P56589 373 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 IFI16Q16666 785 aaKnown RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 EPC2Q52LR7 807 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 ARHGEF16Q5VV41 709 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 PALB2Q86YC2 1186 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 ARHGEF19Q8IW93 802 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 ZKSCAN4Q969J2 545 aaPredicted RBP18.47■□□□□ 0.55
CTSD-204ENST00000433655 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 FZD1Q9UP38 647 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 DAAM1Q9Y4D1 1078 aa18.47■□□□□ 0.55
CTSD-204ENST00000433655 TESPA1A2RU30 521 aaPredicted RBP18.46■□□□□ 0.55
CTSD-204ENST00000433655 RNF40O75150 1001 aa18.46■□□□□ 0.55
CTSD-204ENST00000433655 KRT13P13646 458 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms