RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SLKQ9H2G2 1235 aaPredicted RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 MTG2Q9H4K7 406 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 USP36Q9P275 1121 aaKnown RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 MSRAQ9UJ68 235 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 TMA7Q9Y2S6 64 aaKnown RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 A0A0A6YYJ9 748 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 C2orf78A6NCI8 922 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 GSG1L2A8MUP6 293 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 TGM5O43548 720 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 LSP1P33241 339 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 STAT3P40763 770 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 ADCY7P51828 1080 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 FOXL1Q12952 345 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 GPR158Q5T848 1215 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 KRT40Q6A162 431 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 D2HGDHQ8N465 521 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 PLA2G15Q8NCC3 412 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 HIST1H2AHQ96KK5 128 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 RPL10LQ96L21 214 aaKnown RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 HIST1H2AJQ99878 128 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 NOL10Q9BSC4 688 aaKnown RBP4.83□□□□□ -1.64
CLK1-204ENST00000432425 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
CLK1-204ENST00000432425 OPHN1O60890 802 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 FKBP9O95302 570 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 PHC1P78364 1004 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 MAN2A1Q16706 1144 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 FKBP9P1Q75LS8 142 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 ADGRE4PQ86SQ3 457 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 ZNF808Q8N4W9 903 aaPredicted RBP4.82□□□□□ -1.64
CLK1-204ENST00000432425 ANKRD53Q8N9V6 530 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 HAPLN2Q9GZV7 340 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 MAPRE3Q9UPY8 281 aa4.82□□□□□ -1.64
CLK1-204ENST00000432425 A0A087X0B3 334 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 RAB11FIP3O75154 756 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 PCDH8O95206 1070 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 HNRNPLP14866 589 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLK1-204ENST00000432425 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 GYS2P54840 703 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 ZXDAP98168 799 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 ACAP1Q15027 740 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 MAMDC4Q6UXC1 1216 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 UNQ6494/PRO21346Q6UXR6 183 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 Q6ZSN1 163 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 CLEC14AQ86T13 490 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 SGMS1Q86VZ5 419 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 ZNF610Q8N9Z0 462 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 USP7Q93009 1102 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 VPS11Q9H270 941 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 C14orf93Q9H972 538 aaKnown RBP4.81□□□□□ -1.64
CLK1-204ENST00000432425 AGO3Q9H9G7 860 aaKnown RBP4.81□□□□□ -1.64
CLK1-204ENST00000432425 TLR9Q9NR96 1032 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 RCAN3Q9UKA8 241 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 MYPNQ86TC9 1320 aa4.81□□□□□ -1.64
CLK1-204ENST00000432425 ELL2O00472 640 aaPredicted RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 TOX4O94842 621 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 FSBPO95073 299 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 VSIG10L2P0DP72 767 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 SAFB2Q14151 953 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLK1-204ENST00000432425 TERF2Q15554 542 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 DDB1Q16531 1140 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 GAGE13Q4V321 117 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 CDYL2Q8N8U2 506 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 UIMC1Q96RL1 719 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 MPHOSPH9Q99550 1183 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 OSBPL6Q9BZF3 934 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 TMPRSS5Q9H3S3 457 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 EMC7Q9NPA0 242 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 PCDHB6Q9Y5E3 794 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 CYP27B1O15528 508 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 JUNP05412 331 aaKnown RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 XPAP23025 273 aaPredicted RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 HSD3B2P26439 372 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 HIBADHP31937 336 aaKnown RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 ATP13A4Q4VNC1 1196 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 SDE2Q6IQ49 451 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 GIMAP6Q6P9H5 292 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 RNF207Q6ZRF8 634 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 FRMD7Q6ZUT3 714 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 ZNF496Q96IT1 587 aaPredicted RBP4.8□□□□□ -1.64
CLK1-204ENST00000432425 GPHA2Q96T91 129 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 TCF25Q9BQ70 676 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 IL23AQ9NPF7 189 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 NCDNQ9UBB6 729 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 KCNG1Q9UIX4 513 aa4.8□□□□□ -1.64
CLK1-204ENST00000432425 CLSTN1O94985 981 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 AMHP03971 560 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 C6P13671 934 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 TACR2P21452 398 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 ACRV1P26436 265 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 DHCR24Q15392 516 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 ZBTB41Q5SVQ8 909 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 GAREM2Q75VX8 874 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 DDX46Q7L014 1031 aaKnown RBP4.79□□□□□ -1.64
CLK1-204ENST00000432425 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 SLC5A5Q92911 643 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 ARL8AQ96BM9 186 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms